Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 6
- vacuole 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063081 | Potato | extracellular, vacuole | 90.83 | 90.62 |
| PGSC0003DMT400023183 | Potato | extracellular | 57.8 | 57.67 |
| PGSC0003DMT400092749 | Potato | cytosol | 22.94 | 54.64 |
| PGSC0003DMT400023190 | Potato | extracellular, vacuole | 54.36 | 53.86 |
| PGSC0003DMT400094021 | Potato | plasma membrane, plastid, vacuole | 54.13 | 52.68 |
| PGSC0003DMT400023187 | Potato | extracellular, plasma membrane | 52.52 | 51.0 |
| PGSC0003DMT400045193 | Potato | endoplasmic reticulum, extracellular | 47.71 | 48.83 |
| PGSC0003DMT400038362 | Potato | mitochondrion | 38.07 | 48.26 |
| PGSC0003DMT400095550 | Potato | mitochondrion | 52.75 | 48.02 |
| PGSC0003DMT400023204 | Potato | endoplasmic reticulum, vacuole | 46.79 | 47.0 |
| PGSC0003DMT400045232 | Potato | plasma membrane, vacuole | 47.48 | 46.94 |
| PGSC0003DMT400023192 | Potato | extracellular | 45.64 | 46.5 |
| PGSC0003DMT400023193 | Potato | plasma membrane | 44.95 | 45.58 |
| PGSC0003DMT400083215 | Potato | extracellular | 40.37 | 42.31 |
| PGSC0003DMT400023203 | Potato | plasma membrane, vacuole | 37.39 | 41.16 |
| PGSC0003DMT400023184 | Potato | extracellular, vacuole | 41.74 | 40.99 |
| PGSC0003DMT400003025 | Potato | endoplasmic reticulum, plasma membrane | 39.45 | 40.0 |
| PGSC0003DMT400073646 | Potato | endoplasmic reticulum, vacuole | 38.99 | 39.44 |
Protein Annotations
| EntrezGene:102589100 | MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR021109 | InterPro:IPR033121 | UniProt:M1CA13 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| EnsemblPlantsGene:PGSC0003DMG400024537 | PGSC:PGSC0003DMG400024537 | EnsemblPlants:PGSC0003DMT400063080 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF532 |
| InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI0002965759 |
| RefSeq:XP_006345119.1 | InterPro:Xylanase_inhibitor_I-like | SEG:seg | : | : | : |
Description
Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400024537]
Coordinates
chr3:+:55012112..55014301
Molecular Weight (calculated)
46867.5 Da
IEP (calculated)
8.571
GRAVY (calculated)
0.180
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFTSYQFIL LSSILFSLSS YCIGQTSPQT KAFILPVTKD SSTLQYVTQI GQRTPLVPIK LTIHLGGQTF WVDCENGYVS STYRPALCGS TQCTIAKVNT
101: CGNCSTSAPK IGCNNNACYN TPENPFIKTL YSGGEINEDV LSIQSTDGTN PGKFVKIPSF IFTCVPTFLT EGLASGVKGT VGLGRNRIAL PSQLAEIFSF
201: PRKFAVCLSS STQSSGVIFF GDGMMLPKID VSKDLIFMPL ITNPFGTGSV PFLNEPSSEY YIGVKSIRVN GKTVTINRKL LGIDKRGDGG TKISTGTPYS
301: ILETSIYDVV TKAFIDELSN ATRVAAVAPF ETCFSSKSVG STRVGPAVPT IDLVLQTTRV YWRIFGANSM VKVSQDVICL GFVNGGIKPT TSIVIGGYQL
401: ADNLLQFDLA KSTLGFSSSL LFHQTTCANF NFTTMA
101: CGNCSTSAPK IGCNNNACYN TPENPFIKTL YSGGEINEDV LSIQSTDGTN PGKFVKIPSF IFTCVPTFLT EGLASGVKGT VGLGRNRIAL PSQLAEIFSF
201: PRKFAVCLSS STQSSGVIFF GDGMMLPKID VSKDLIFMPL ITNPFGTGSV PFLNEPSSEY YIGVKSIRVN GKTVTINRKL LGIDKRGDGG TKISTGTPYS
301: ILETSIYDVV TKAFIDELSN ATRVAAVAPF ETCFSSKSVG STRVGPAVPT IDLVLQTTRV YWRIFGANSM VKVSQDVICL GFVNGGIKPT TSIVIGGYQL
401: ADNLLQFDLA KSTLGFSSSL LFHQTTCANF NFTTMA
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.