Factsheet for PGSC0003DMT400023190

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g079980.2.1	Tomato	extracellular	93.86	94.51
PGSC0003DMT400092749	Potato	cytosol	38.41	92.35
PGSC0003DMT400094021	Potato	plasma membrane, plastid, vacuole	86.59	85.04
PGSC0003DMT400095550	Potato	mitochondrion	81.59	74.95
PGSC0003DMT400023187	Potato	extracellular, plasma membrane	62.95	61.69
PGSC0003DMT400023183	Potato	extracellular	55.91	56.29
PGSC0003DMT400063081	Potato	extracellular, vacuole	54.09	54.46
PGSC0003DMT400063080	Potato	endoplasmic reticulum, extracellular	53.86	54.36
HORVU1Hr1G061380.1	Barley	extracellular, golgi	50.0	51.16
PGSC0003DMT400023184	Potato	extracellular, vacuole	51.59	51.13
TraesCS1A01G251900.1	Wheat	endoplasmic reticulum, extracellular	50.23	50.8
TraesCS1B01G263100.1	Wheat	endoplasmic reticulum, extracellular	50.0	50.57
TraesCS1D01G251700.1	Wheat	extracellular, golgi	49.55	50.0
Os05t0402900-01	Rice	extracellular	49.32	49.66
Os05t0403000-01	Rice	extracellular	48.64	48.97
Zm00001d038151_P001	Maize	extracellular	48.64	48.86
Os05t0403100-00	Rice	extracellular	38.64	48.71
OQU77960	Sorghum	endoplasmic reticulum, extracellular	49.09	48.0
Os05t0403300-01	Rice	golgi	47.05	45.49
PGSC0003DMT400045193	Potato	endoplasmic reticulum, extracellular	41.82	43.19
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	42.5	43.09
PGSC0003DMT400023192	Potato	extracellular	41.82	42.99
PGSC0003DMT400023193	Potato	plasma membrane	41.14	42.09
PGSC0003DMT400038362	Potato	mitochondrion	32.05	40.99
PGSC0003DMT400073646	Potato	endoplasmic reticulum, vacuole	39.77	40.6
PGSC0003DMT400083215	Potato	extracellular	37.73	39.9
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	38.41	39.3
PGSC0003DMT400045232	Potato	plasma membrane, vacuole	39.32	39.23
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	35.23	39.14

Protein Annotations

EntrezGene:102590210	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	UniProt:M1AHY2	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
EnsemblPlantsGene:PGSC0003DMG400008982	PGSC:PGSC0003DMG400008982	EnsemblPlants:PGSC0003DMT400023190	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF532
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002958BBB
RefSeq:XP_006349245.1	InterPro:Xylanase_inhibitor_I-like	SEG:seg	:	:	:

Description

Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400008982]

Coordinates

chr1:+:61814380..61815980

Molecular Weight (calculated)

47204.7 Da

IEP (calculated)

9.085

GRAVY (calculated)

0.086

Length

440 amino acids

Sequence
(BLAST)

001: MVSKISSLSF FLSLLLLFSL SSAKTPPKPR AFLLPITKDA ATKQFITTIY QRTPLVPAKL TIDLGQRFLW VDCDKGYVSS SYKPVPCGSI PCKRSFSGAC
101: TESCVGSPSP GCNNNTCGQT IYNPFIRTST TGELAEDVVS LQSTDGSNPR KYFSTNGVVF GCGSTFLLEK LAKGVNGILG LGNGYVGFPT QLANAFSVPR
201: KFAICLTSST TSRGVIFFGD SPYVFLPGMD VSKRLVYTPL LNNPVSTSGS YFVGEPSVEY FIGVTSIKIN GNVVPINNTL LDITKDGKGG TKISTVDPYT
301: KLETSIYNAL TKAFVKSLAK VPRVKPVAPF EVCYNRTSLG STRVGPGVPP IELVLGNKNA TTSWNIWGSN SMVAVNDDVL CLGFVDGGVE FEPTTSIVIG
401: AHQIENNFLQ FDIANKRLGY TSSLLFGQTT CGNFNFTSKA

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.