Factsheet for PGSC0003DMT400023183

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080010.2.1	Tomato	extracellular	97.25	97.03
VIT_05s0020g02730.t01	Wine grape	plasma membrane, vacuole	67.96	68.28
GSMUA_Achr8P09510_001	Banana	endoplasmic reticulum, extracellular	38.22	61.85
PGSC0003DMT400092749	Potato	cytosol	25.17	60.11
PGSC0003DMT400063080	Potato	endoplasmic reticulum, extracellular	57.67	57.8
KRG92423	Soybean	nucleus	57.67	57.53
PGSC0003DMT400063081	Potato	extracellular, vacuole	56.98	56.98
PGSC0003DMT400023190	Potato	extracellular, vacuole	56.29	55.91
KRH34381	Soybean	endoplasmic reticulum, plasma membrane	56.29	55.41
PGSC0003DMT400094021	Potato	plasma membrane, plastid, vacuole	55.61	54.24
PGSC0003DMT400095550	Potato	mitochondrion	54.92	50.1
PGSC0003DMT400023187	Potato	extracellular, plasma membrane	49.66	48.33
PGSC0003DMT400023184	Potato	extracellular, vacuole	46.45	45.72
PGSC0003DMT400045193	Potato	endoplasmic reticulum, extracellular	43.48	44.6
PGSC0003DMT400045232	Potato	plasma membrane, vacuole	44.16	43.76
PGSC0003DMT400083215	Potato	extracellular	41.19	43.27
PGSC0003DMT400038362	Potato	mitochondrion	33.41	42.44
PGSC0003DMT400023192	Potato	extracellular	41.42	42.29
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	41.88	42.17
PGSC0003DMT400023193	Potato	plasma membrane	40.96	41.63
PGSC0003DMT400073646	Potato	endoplasmic reticulum, vacuole	40.27	40.84
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	39.59	40.23
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	34.1	37.63

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	ProteinID:AAP84703	ProteinID:AAP84703.1	EMBL:AY321357	InterPro:Aspartic_peptidase_A1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M1AHX8	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400008978	PGSC:PGSC0003DMG400008978	EnsemblPlants:PGSC0003DMT400023183	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF532	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0002966033	InterPro:Xylanase_inhibitor_I-like	:	:

Description

Xyloglucanase inhibitor [Source:PGSC_GENE;Acc:PGSC0003DMG400008978]

Coordinates

chr1:+:61773435..61774915

Molecular Weight (calculated)

46828.9 Da

IEP (calculated)

8.313

GRAVY (calculated)

0.141

Length

437 amino acids

Sequence
(BLAST)

001: MASSYCLHAI LLCSLLFITS TIAQNQTSFR PKGLIIPVTK DASTLQYLTQ IQQRTPLVPI SLTLDLGGQF LWVDCDQGYV SSSYKPARCR SAQCSLGGAS
101: GCGECFSPPR PGCNNNTCGL LPDNTVTRTA TSGELASDIV SVQSSNGKNP GRSVSDKNFL FVCSATFLLQ GLASGVKGMA GLGRTRISLP SQFSAEFSFP
201: RKFALCLTSS NSKGVVLFGD GPYFFLPNRE FSNNDFQYTP LFINPVSTAS AFSSGQPSSE YFIGVKSIKI NQKVVPINTT LLSIDNQGVG GTKISTVNPY
301: TILETSLYNA ITNFFVKELA NVTRVAAVAP FRVCFDSRNI GSTRVGPAVP SIDLVLQNEN VVWTIFGANS MVQVSENVLC LGVLDGGVNS RTSIVIGGHT
401: IEDNLLQFDH AASRLGFTSS ILFRQTTCAN FNFTSIA

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.