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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 extracellular: 22364583
extracellular: 22892874
extracellular: 26583031
nucleus: 28394025
endoplasmic reticulum: 29145071
extracellular: 29876421
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 22892874 doi
EH Konozy, H Rogniaux, M Causse, M Faurobert
Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com
msms PMID: 26583031 doi
F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 29145071 doi
P Ibort, H Imai, M Uemura, R Aroca
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
msms PMID: 22364583 doi
P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez
Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400023183 Potato extracellular 97.03 97.25
VIT_05s0020g02730.t01 Wine grape plasma membrane, vacuole 68.49 68.97
GSMUA_Achr8P09510_001 Banana endoplasmic reticulum, extracellular 38.36 62.22
KRG92423 Soybean nucleus 59.13 59.13
KRH34381 Soybean endoplasmic reticulum, plasma membrane 57.53 56.76
Solyc01g079960.2.1 Tomato plasma membrane 56.85 56.46
Solyc01g079980.2.1 Tomato extracellular 55.71 55.84
Solyc01g079970.2.1 Tomato extracellular, plasma membrane 55.94 55.18
Solyc03g115040.2.1 Tomato mitochondrion 56.16 54.19
Solyc01g079990.1.1 Tomato plastid 33.56 48.68
Solyc01g080000.1.1 Tomato extracellular 47.72 46.97
Solyc08g076640.1.1 Tomato extracellular, plasma membrane 43.84 43.94
Solyc08g076620.1.1 Tomato extracellular, plasma membrane 43.15 43.35
Solyc02g063480.2.1 Tomato plasma membrane 42.47 42.66
Solyc01g080020.2.1 Tomato extracellular, plasma membrane 40.41 42.45
Solyc08g076630.1.1 Tomato extracellular, plasma membrane 42.47 42.27
Solyc01g079950.2.1 Tomato extracellular 40.64 41.59
Solyc01g079940.2.1 Tomato nucleus 40.64 41.4
Solyc01g079900.1.1 Tomato cytosol, plastid 18.72 40.8
Solyc01g098770.1.1 Tomato extracellular 39.27 40.28
Solyc01g079930.1.1 Tomato extracellular, plasma membrane, vacuole 39.5 39.95
Solyc09g065000.2.1 Tomato endoplasmic reticulum, vacuole 37.9 38.52
Solyc01g079920.2.1 Tomato extracellular, plasma membrane 40.64 30.9
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016787GO:GO:0019538
GO:GO:0030163InterPro:IPR021109InterPro:IPR033121UniProt:K4AXP6InterPro:PEPTIDASE_A1PFAM:PF14541
PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF532InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630
SignalP:SignalP-noTMEnsemblPlantsGene:Solyc01g080010.2EnsemblPlants:Solyc01g080010.2.1InterPro:TAXi_CInterPro:TAXi_NUniParc:UPI0002762145
InterPro:Xylanase_inhibitor_I-like:::::
Description
No Description!
Coordinates
chr1:-:79139189..79140725
Molecular Weight (calculated)
46551.6 Da
IEP (calculated)
8.064
GRAVY (calculated)
0.177
Length
438 amino acids
Sequence
(BLAST)
001: MASSNCLHAI LLCSLLFITS TIAQNQTSFR PKGLIIPVTK DASTLQYLTQ IQQRTPLVPI SLTLDLGGQF LWVDCDQGYV SSSYKPARCG SAQCSLGGAS
101: GCGECFSPPR PGCNNNTCGL LPDNTVTGTA TSGELASDVV SVESSNGKNP GRSVSDKNFL FVCGATFLLQ GLASGVKGMA GLGRTKISLP SQFSAEFSFP
201: RKFALCLTSS SNSKGVVLFG DGPYFFLPNR QFSNNDFQYT PLFINPVSTA SAFSSGQPSS EYFIGVKSIK INQKVVPINT TLLSIDNQGV GGTKISTVNP
301: YTILETSLYN AITNFFVKEL ANVTRVAVVA PFRVCFDSRD IGSTRVGPAV PSIDLVLQNA NVVWTIFGAN SMVQVSENVL CLGVLDGGVN ARTSIVIGGH
401: TIEDNLLQFD HAASRLGFTS SILFRQTTCA NFNFTSIA
Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.