Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073646 | Potato | endoplasmic reticulum, vacuole | 94.85 | 93.97 |
| VIT_14s0128g00200.t01 | Wine grape | extracellular, plasma membrane, vacuole | 50.59 | 49.2 |
| KRH68584 | Soybean | nucleus | 46.6 | 46.6 |
| KRG96855 | Soybean | endoplasmic reticulum | 45.43 | 44.8 |
| Solyc01g080010.2.1 | Tomato | extracellular | 40.28 | 39.27 |
| Solyc08g076630.1.1 | Tomato | extracellular, plasma membrane | 40.28 | 39.09 |
| Solyc01g079900.1.1 | Tomato | cytosol, plastid | 18.27 | 38.81 |
| Solyc01g079960.2.1 | Tomato | plasma membrane | 39.81 | 38.55 |
| Solyc02g063480.2.1 | Tomato | plasma membrane | 39.34 | 38.53 |
| Solyc03g115040.2.1 | Tomato | mitochondrion | 40.28 | 37.89 |
| Solyc01g079980.2.1 | Tomato | extracellular | 38.64 | 37.76 |
| Solyc08g076640.1.1 | Tomato | extracellular, plasma membrane | 38.41 | 37.53 |
| Solyc01g079970.2.1 | Tomato | extracellular, plasma membrane | 38.41 | 36.94 |
| Solyc08g076620.1.1 | Tomato | extracellular, plasma membrane | 37.0 | 36.24 |
| Solyc01g079940.2.1 | Tomato | nucleus | 36.3 | 36.05 |
| Solyc01g079950.2.1 | Tomato | extracellular | 36.07 | 35.98 |
| Solyc01g080020.2.1 | Tomato | extracellular, plasma membrane | 34.89 | 35.73 |
| Solyc01g079990.1.1 | Tomato | plastid | 24.36 | 34.44 |
| Solyc01g079930.1.1 | Tomato | extracellular, plasma membrane, vacuole | 33.96 | 33.49 |
| Solyc09g065000.2.1 | Tomato | endoplasmic reticulum, vacuole | 33.26 | 32.95 |
| Solyc01g080000.1.1 | Tomato | extracellular | 33.96 | 32.58 |
| Solyc01g079920.2.1 | Tomato | extracellular, plasma membrane | 37.0 | 27.43 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030163 | InterPro:IPR021109 | InterPro:IPR033121 | UniProt:K4B0R4 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 |
| PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF399 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc01g098770.1 | EnsemblPlants:Solyc01g098770.1.1 | InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI000276898D |
| InterPro:Xylanase_inhibitor_I-like | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:89206602..89207885
Molecular Weight (calculated)
46075.5 Da
IEP (calculated)
8.552
GRAVY (calculated)
-0.005
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSILNFLL TFLAVSNLVY LSQSQVTRAP FKPDGLALQV FKDSATGLHI TNITKGTPQQ SIPLLIDLNG NFLWLNCEKN YLSSTYLAPF CQSTQCSRFG
101: SHSCNKCFST TPRPGCHNNT CAVTTTNPLT SQTATSEVAQ DSLSIQSITQ SGSNYGPLVT IRHFLFACSP SSLSQDPFPN NVQGVAGLAH GSVSLPIQFA
201: SHFGFHRQFS LCLPSSSQKN GAIFFGTSGL NGTQTGNLTY TPIIIGSQGE YFIPVRSIRV NNKPVPLNRS SLISTRTRNF GGAMISTTAP YTALEHNIFT
301: TFTQFFANQS SGISQVNPIS PFGLCFNSNV SSITNVPNID FVMQNKNVTW TIVGTNSVVE ARPGVSCLAF VDGGQNPKAP IVIGVHQLED NFVEFDLVRS
401: RLGVSSSLLS RNTSCSNFNF TSKSSFD
101: SHSCNKCFST TPRPGCHNNT CAVTTTNPLT SQTATSEVAQ DSLSIQSITQ SGSNYGPLVT IRHFLFACSP SSLSQDPFPN NVQGVAGLAH GSVSLPIQFA
201: SHFGFHRQFS LCLPSSSQKN GAIFFGTSGL NGTQTGNLTY TPIIIGSQGE YFIPVRSIRV NNKPVPLNRS SLISTRTRNF GGAMISTTAP YTALEHNIFT
301: TFTQFFANQS SGISQVNPIS PFGLCFNSNV SSITNVPNID FVMQNKNVTW TIVGTNSVVE ARPGVSCLAF VDGGQNPKAP IVIGVHQLED NFVEFDLVRS
401: RLGVSSSLLS RNTSCSNFNF TSKSSFD
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.