Factsheet for Solyc01g079900.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	91.54	42.4
Solyc01g079940.2.1	Tomato	nucleus	70.15	32.79
Solyc01g079950.2.1	Tomato	extracellular	66.67	31.31
Solyc01g079930.1.1	Tomato	extracellular, plasma membrane, vacuole	65.17	30.25
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	54.23	27.53
Solyc01g079920.2.1	Tomato	extracellular, plasma membrane	72.64	25.35
Solyc01g079990.1.1	Tomato	plastid	37.31	24.83
Solyc03g115040.2.1	Tomato	mitochondrion	47.76	21.15
Solyc08g076640.1.1	Tomato	extracellular, plasma membrane	44.28	20.37
Solyc02g063480.2.1	Tomato	plasma membrane	43.78	20.18
Solyc09g065000.2.1	Tomato	endoplasmic reticulum, vacuole	41.79	19.49
Solyc01g079980.2.1	Tomato	extracellular	42.29	19.45
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	40.3	19.42
Solyc01g079960.2.1	Tomato	plasma membrane	42.29	19.27
Solyc01g080010.2.1	Tomato	extracellular	40.8	18.72
Solyc01g079970.2.1	Tomato	extracellular, plasma membrane	41.29	18.69
Solyc08g076630.1.1	Tomato	extracellular, plasma membrane	40.8	18.64
Solyc08g076620.1.1	Tomato	extracellular, plasma membrane	40.3	18.58
Solyc01g098770.1.1	Tomato	extracellular	38.81	18.27
Solyc01g080000.1.1	Tomato	extracellular	35.32	15.96

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K4AXN5	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF538	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	EnsemblPlantsGene:Solyc01g079900.1
EnsemblPlants:Solyc01g079900.1.1	InterPro:TAXi_C	UniParc:UPI0002761F45	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:-:79073942..79074547

Molecular Weight (calculated)

22279.8 Da

IEP (calculated)

9.563

GRAVY (calculated)

-0.126

Length

201 amino acids

Sequence
(BLAST)

001: MIDISKNLVY TPLVKNTFTT SKFSEYHVKV SSIRIAGKNV PLNKTMLKTK QGVGGTRIST TTPFTILHTT IYDAVKTAFI NALSKNVTVV EPPTKQFGLC
101: FSSKNVRNTN VGPDVPVIDI VFHKKSAFWR IYGSNSVVQV NKDAICLAFE GQDQTRAPSI DIGGYQLEEN LLIFDLVEEK IGFSSSLKLQ QTSCSEYEKT
201: S

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.