Factsheet for Solyc01g079980.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 28847647
extracellular: 29876421

msms PMID: 28847647 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA. Electronic address: jabadia@eead.csic.es.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023190	Potato	extracellular, vacuole	94.51	93.86
Solyc01g079960.2.1	Tomato	plasma membrane	88.1	87.3
Solyc01g079970.2.1	Tomato	extracellular, plasma membrane	83.07	81.76
Solyc01g079990.1.1	Tomato	plastid	42.79	61.92
Solyc01g080010.2.1	Tomato	extracellular	55.84	55.71
HORVU1Hr1G061380.1	Barley	extracellular, golgi	50.11	50.93
TraesCS1A01G251900.1	Wheat	endoplasmic reticulum, extracellular	50.34	50.57
Os05t0402900-01	Rice	extracellular	50.57	50.57
Solyc01g080000.1.1	Tomato	extracellular	51.49	50.56
TraesCS1B01G263100.1	Wheat	endoplasmic reticulum, extracellular	50.11	50.34
Solyc03g115040.2.1	Tomato	mitochondrion	51.72	49.78
TraesCS1D01G251700.1	Wheat	extracellular, golgi	49.66	49.77
Zm00001d038151_P001	Maize	extracellular	49.43	49.32
Os05t0403000-01	Rice	extracellular	48.51	48.51
OQU77960	Sorghum	endoplasmic reticulum, extracellular	49.43	48.0
Os05t0403100-00	Rice	extracellular	37.99	47.56
Os05t0403300-01	Rice	golgi	47.14	45.27
Solyc01g079900.1.1	Tomato	cytosol, plastid	19.45	42.29
Solyc01g079950.2.1	Tomato	extracellular	41.19	42.06
Solyc02g063480.2.1	Tomato	plasma membrane	41.88	41.97
Solyc01g079940.2.1	Tomato	nucleus	40.27	40.93
Solyc08g076640.1.1	Tomato	extracellular, plasma membrane	39.82	39.82
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	37.76	39.57
Solyc08g076620.1.1	Tomato	extracellular, plasma membrane	39.36	39.45
Solyc08g076630.1.1	Tomato	extracellular, plasma membrane	39.59	39.32
Solyc01g079930.1.1	Tomato	extracellular, plasma membrane, vacuole	38.67	39.03
Solyc01g098770.1.1	Tomato	extracellular	37.76	38.64
Solyc09g065000.2.1	Tomato	endoplasmic reticulum, vacuole	36.84	37.35
Solyc01g079920.2.1	Tomato	extracellular, plasma membrane	43.02	32.64

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K4AXP3	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF532	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g079980.2	EnsemblPlants:Solyc01g079980.2.1	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002762142
InterPro:Xylanase_inhibitor_I-like	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:79120576..79122030

Molecular Weight (calculated)

47002.7 Da

IEP (calculated)

8.861

GRAVY (calculated)

0.161

Length

437 amino acids

Sequence
(BLAST)

001: MVSKIISLSF FFPLLLLFSL SSAKTPSKPR AFLLPITKDE ATKQFITTIY QRIPLVPAKL TIDLGQRFLW VDCDIGYVSS SYKPVPCGSI PCKRSFSGAC
101: VESCVGSPSP GCNNNTCGQS IYNPFIRTST SGELAQDVVS LQSTDGSKPR KYLSTTNGVV FGCGSTFLLE KLAKGVNGIL GLGNGYVGFP TQLANAFTIP
201: RKFAICLTSS TTSRGVIFFG DSPYVFLPGM DVSKRLVYTP LLNNPVSTSG SYFVGEPSVE YFIGVTSIKI NGNVVPINTT LLDITKDGKG GTKISTVDPY
301: TKLETSIYNA LTKAFVKSLS KVPRVKPLAP FEVCYNRSSL GSTRVGPGVP PIELVLGTTS WNIWGSNSMV AVNDDVLCLG FVDGGVEFEP TTSIVIGAHQ
401: IEDNFLQFDI ANKRLGFTSS LLFSQTTCAN FNFTSKA

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.