Factsheet for Solyc01g079940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 8
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023193	Potato	plasma membrane	95.35	95.35
Solyc01g079950.2.1	Tomato	extracellular	76.98	77.34
Solyc01g079900.1.1	Tomato	cytosol, plastid	32.79	70.15
Solyc01g079930.1.1	Tomato	extracellular, plasma membrane, vacuole	69.07	68.59
Solyc01g079920.2.1	Tomato	extracellular, plasma membrane	76.05	56.77
Solyc08g076640.1.1	Tomato	extracellular, plasma membrane	44.42	43.71
Solyc08g076630.1.1	Tomato	extracellular, plasma membrane	44.42	43.41
Solyc03g115040.2.1	Tomato	mitochondrion	45.35	42.95
Solyc08g076620.1.1	Tomato	extracellular, plasma membrane	43.49	42.89
Solyc02g063480.2.1	Tomato	plasma membrane	43.02	42.43
Solyc01g080010.2.1	Tomato	extracellular	41.4	40.64
Solyc01g079960.2.1	Tomato	plasma membrane	41.63	40.59
Solyc01g079970.2.1	Tomato	extracellular, plasma membrane	41.63	40.32
Solyc01g079980.2.1	Tomato	extracellular	40.93	40.27
Solyc01g079990.1.1	Tomato	plastid	27.44	39.07
Solyc01g098770.1.1	Tomato	extracellular	36.05	36.3
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	34.42	35.49
Solyc01g080000.1.1	Tomato	extracellular	36.28	35.06
Solyc09g065000.2.1	Tomato	endoplasmic reticulum, vacuole	31.16	31.09

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.974	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787
GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K4AXN9	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF538	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g079940.2	EnsemblPlants:Solyc01g079940.2.1	InterPro:TAXi_C	InterPro:TAXi_N
UniParc:UPI000276213E	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:79094809..79097005

Molecular Weight (calculated)

47428.5 Da

IEP (calculated)

8.568

GRAVY (calculated)

0.079

Length

430 amino acids

Sequence
(BLAST)

001: MVTFKLPLPM LLLFLLLNIF VCSSEVLYIP VTKDASTLEY TIEVGQRTPL IPIKLLINLG GRSLWVDCDK GYKSSTYKPA VCNSTQCTFS KSHACGDCIF
101: KPQVQPGCSN NTCYIWGENP LINSFHDRAE LAEDVLTIGS TPGVPLTWPR FIFSCLLDQD MMRQFANGVT GVAGFGRESP VSIPNQLALD SRFTKKFGIC
201: LSSSTQSRGV IFIGSGPYSV YNPKKIDISN DILYTKLIAN TRGGFVTSEE YYIQVSSIRI AGQDIPLNKT LLSINKKNGV AGTRISTATP FTILHTTIYD
301: AFKTAFIKAL PKNVTIVEPP MKPYGLCFSS KNIKSSNVGP DVPVIDFVLH KPSAFWRLYG TNSVVQVSKD VMCLAFVGQD QTWEPSIVIG GHQMEENLLV
401: FDLVRRNIGF SSSLKLQQAS CSKYDNTIPV

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.