Factsheet for PGSC0003DMT400023193

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g079940.2.1	Tomato	nucleus	95.35	95.35
PGSC0003DMT400023192	Potato	extracellular	82.09	82.48
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	69.3	68.66
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	53.02	57.58
PGSC0003DMT400045193	Potato	endoplasmic reticulum, extracellular	45.35	45.77
PGSC0003DMT400063080	Potato	endoplasmic reticulum, extracellular	45.58	44.95
PGSC0003DMT400063081	Potato	extracellular, vacuole	44.42	43.71
PGSC0003DMT400092749	Potato	cytosol	18.14	42.62
PGSC0003DMT400038362	Potato	mitochondrion	33.95	42.44
PGSC0003DMT400045232	Potato	plasma membrane, vacuole	43.49	42.4
PGSC0003DMT400023190	Potato	extracellular, vacuole	42.09	41.14
PGSC0003DMT400023183	Potato	extracellular	41.63	40.96
PGSC0003DMT400023187	Potato	extracellular, plasma membrane	41.16	39.42
PGSC0003DMT400094021	Potato	plasma membrane, plastid, vacuole	40.93	39.29
PGSC0003DMT400073646	Potato	endoplasmic reticulum, vacuole	38.37	38.28
PGSC0003DMT400095550	Potato	mitochondrion	40.23	36.12
PGSC0003DMT400083215	Potato	extracellular	34.88	36.06
PGSC0003DMT400023184	Potato	extracellular, vacuole	36.28	35.14
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	33.02	33.02

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	ProteinID:ADU58603	ProteinID:ADU58603.1	ProteinID:ADX66725	ProteinID:ADX66725.1
InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0005575	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538
EMBL:HQ342695	EMBL:HQ847858	InterPro:IPR021109	InterPro:IPR033121	UniProt:M1AHY4	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400008985	PGSC:PGSC0003DMG400008985	EnsemblPlants:PGSC0003DMT400023193	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF538	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI00029509D5	SEG:seg	:	:

Description

Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400008985]

Coordinates

chr1:+:61847861..61849980

Molecular Weight (calculated)

47450.7 Da

IEP (calculated)

8.674

GRAVY (calculated)

0.110

Length

430 amino acids

Sequence
(BLAST)

001: MVTFKLPLSM LLLFLLLNIF LCSSEVLYIP VTKDASTLEY IIEVGQRTPL IPIKLLINLG GRSLWVDCDK GYKSSTYKPA VCNSTQCTFA KSHACGDCIF
101: KPQVQPGCSN NTCYIWGENP LINSFHDRAE IAEDVLAIGS TPGVRVTWPR FIFSCLLDQD MMRQFANGVT GVAGFGRESP VSIPNQLALD SRFTKKFGIC
201: LSSSTKSRGV IFIGSGPYYV YNPKKIDISN DILYTKLIAN TRGGFVTSEE YYIQVSSIRI AGQDVPLNKT LLSINKKNGV AGTRISTATP FTILHTTIYD
301: AFKTAFIKAL PKNVTIVEPP MKQFGLCFSS KNIKSTNVGP DVPVIDFVLH KPSAFWRIYG TNSVVQVNKD VMCLAFVGQD QTWEPSIVIG GHQMEENLLI
401: FDLVGRNIGF SSSLKLQQAS CSKYDNTILG

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.