Factsheet for PGSC0003DMT400063081

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115040.2.1	Tomato	mitochondrion	94.97	91.41
PGSC0003DMT400063080	Potato	endoplasmic reticulum, extracellular	90.62	90.83
PGSC0003DMT400023183	Potato	extracellular	56.98	56.98
PGSC0003DMT400023190	Potato	extracellular, vacuole	54.46	54.09
PGSC0003DMT400092749	Potato	cytosol	22.43	53.55
PGSC0003DMT400094021	Potato	plasma membrane, plastid, vacuole	54.69	53.35
PGSC0003DMT400023187	Potato	extracellular, plasma membrane	52.17	50.78
PGSC0003DMT400038362	Potato	mitochondrion	38.22	48.55
PGSC0003DMT400045193	Potato	endoplasmic reticulum, extracellular	47.14	48.36
PGSC0003DMT400095550	Potato	mitochondrion	52.4	47.81
PGSC0003DMT400045232	Potato	plasma membrane, vacuole	48.05	47.62
PGSC0003DMT400023204	Potato	endoplasmic reticulum, vacuole	46.45	46.77
PGSC0003DMT400023192	Potato	extracellular	44.85	45.79
PGSC0003DMT400023193	Potato	plasma membrane	43.71	44.42
PGSC0003DMT400083215	Potato	extracellular	40.27	42.31
PGSC0003DMT400073646	Potato	endoplasmic reticulum, vacuole	40.5	41.07
PGSC0003DMT400023184	Potato	extracellular, vacuole	41.19	40.54
PGSC0003DMT400023203	Potato	plasma membrane, vacuole	36.61	40.4
PGSC0003DMT400003025	Potato	endoplasmic reticulum, plasma membrane	39.13	39.77

Protein Annotations

EntrezGene:102589423	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	UniProt:M1CA14	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
EnsemblPlantsGene:PGSC0003DMG400024538	PGSC:PGSC0003DMG400024538	EnsemblPlants:PGSC0003DMT400063081	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF532
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI00029580DD
RefSeq:XP_006345120.1	InterPro:Xylanase_inhibitor_I-like	SEG:seg	:	:	:

Description

Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400024538]

Coordinates

chr3:+:55014549..55015862

Molecular Weight (calculated)

46849.4 Da

IEP (calculated)

8.261

GRAVY (calculated)

0.154

Length

437 amino acids

Sequence
(BLAST)

001: MSFTSYCLIL FCSLLLSISS YCIGQTSSPQ TKAFILPVTK DSSTLQYITQ IGQRTPLVPI KLTIHLGGQT LWVDCENGYV SSTYQPLLCG STQCTIAKVD
101: TCANCSTSAP KIGCNDNACY NTPENPFIKT LYSGGQLNED VLSIQSTDGS NPGKFVKIPN FIFTCAPTFL TEGLASEVKG TVGLGRNRIA LPSQLAEIFS
201: FPRKFAVCLS SSTQSSGVIF FGDGMMLPNI DVSKDLIITP LITNPFGTGS VPSLNEPSSE YYIGVKSIRV NGKPVTINKK LLGVDKSGNG GTKISTGSPY
301: SMLESSIYNV VTKAFIDELS NATRVAAVAP FETCFSSKSV GSTRVGPAVP TIDLVLQTTR VYWRIFGANS MVKVSQDVIC LGFVNGGIKR TASIVIGGYQ
401: LEDNLLHFDL ARSTLGFSSS LLFHQTTCAN FNFTTKA

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.