Factsheet for Solyc01g080020.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g075780.1.1
Solyc11g073060.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G19120.1	Solyc06g075780.1.1	AT3G46090.1	17259181
AT5G19120.1	Solyc11g073060.1.1	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083215	Potato	extracellular	94.96	95.19
VIT_05s0020g02720.t01	Wine grape	extracellular, plasma membrane	43.41	49.45
KRH51036	Soybean	plasma membrane, vacuole	44.84	45.17
KRH02113	Soybean	endoplasmic reticulum, vacuole	45.56	43.98
KRH20901	Soybean	vacuole	40.53	41.94
KRH11388	Soybean	plasma membrane, vacuole	40.29	41.69
Solyc01g080010.2.1	Tomato	extracellular	42.45	40.41
Solyc01g079900.1.1	Tomato	cytosol, plastid	19.42	40.3
AT5G19120.1	Thale cress	endoplasmic reticulum, vacuole	35.49	38.34
Solyc01g079980.2.1	Tomato	extracellular	39.57	37.76
CDX92553	Canola	endoplasmic reticulum, vacuole	34.05	37.37
Solyc03g115040.2.1	Tomato	mitochondrion	40.53	37.22
Solyc01g079960.2.1	Tomato	plasma membrane	39.09	36.96
Solyc01g079970.2.1	Tomato	extracellular, plasma membrane	39.33	36.94
CDX88901	Canola	extracellular	34.05	36.69
CDX70865	Canola	extracellular	34.29	36.57
Bra002214.1-P	Field mustard	endoplasmic reticulum, extracellular	33.57	36.55
CDY13979	Canola	endoplasmic reticulum, vacuole	33.57	36.55
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	33.81	36.43
Solyc01g079950.2.1	Tomato	extracellular	36.69	35.75
Solyc01g098770.1.1	Tomato	extracellular	35.73	34.89
Solyc08g076640.1.1	Tomato	extracellular, plasma membrane	36.45	34.78
Solyc08g076630.1.1	Tomato	extracellular, plasma membrane	36.69	34.77
Solyc01g079940.2.1	Tomato	nucleus	35.49	34.42
Solyc08g076620.1.1	Tomato	extracellular, plasma membrane	35.73	34.17
Solyc01g079990.1.1	Tomato	plastid	24.7	34.11
Solyc01g080000.1.1	Tomato	extracellular	36.21	33.93
Solyc01g079930.1.1	Tomato	extracellular, plasma membrane, vacuole	35.01	33.72
Solyc09g065000.2.1	Tomato	endoplasmic reticulum, vacuole	34.53	33.41
Solyc02g063480.2.1	Tomato	plasma membrane	34.53	33.03
CDY72428	Canola	extracellular	10.07	31.58
Solyc01g079920.2.1	Tomato	extracellular, plasma membrane	35.73	25.87

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538
GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	UniProt:K4AXP7	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF553	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g080020.2	EnsemblPlants:Solyc01g080020.2.1	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix
UniParc:UPI0002762146	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:79146733..79148363

Molecular Weight (calculated)

45343.7 Da

IEP (calculated)

5.727

GRAVY (calculated)

0.123

Length

417 amino acids

Sequence
(BLAST)

001: MASLVQFLPL FPFFFLVSFC VSHGPFLPKA IILPVNKDPS TFQYVTQLYM GATHRAPIKL VVDLEGSFLW ADCGLTSDSS SQKLVPCNSL KCSMAKPNGC
101: TNDNKICGLK SENPFTRLAA TGELAEDMFA VEFIDELKTG SVASIHQFLF SCTSSTLLQG LARGAKGMLG LGNSRIALPS QLSDTFGFQR KFAICLSSSN
201: GAIISGESPY LSLLSHDVSR SMLYTPLISS RNGVSEEYYI NVKSLKINGK KLSLNTTLLT MDGEGQGGTR ISTISPFTTM KTSIYKTFVE AYERFGFSMG
301: LTKVEPIAPF GLCFSTKLEE GLNVPSVDLV LQSEMVKWRI YESNSMVKVS DEVMCLGFLD GGANQKASIV IGGHQLEDNL LEFNLGTSML GFTSSLSMVE
401: TSCSDFMFSK DSSPFDS

Best Arabidopsis Sequence Match ( AT5G19120.1 )
(BLAST)

001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL

Arabidopsis Description

AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.