Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002214.1-P | Field mustard | endoplasmic reticulum, extracellular | 91.91 | 91.91 |
| CDX92553 | Canola | endoplasmic reticulum, vacuole | 90.86 | 91.58 |
| AT5G19120.1 | Thale cress | endoplasmic reticulum, vacuole | 77.55 | 76.94 |
| CDX88901 | Canola | extracellular | 76.76 | 75.97 |
| CDX70865 | Canola | extracellular | 77.02 | 75.45 |
| CDY59021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 75.72 | 74.94 |
| CDY72428 | Canola | extracellular | 25.59 | 73.68 |
| VIT_05s0020g02720.t01 | Wine grape | extracellular, plasma membrane | 37.86 | 39.62 |
| CDY37437 | Canola | mitochondrion, plastid | 10.71 | 34.75 |
| KRH51036 | Soybean | plasma membrane, vacuole | 37.08 | 34.3 |
| Solyc01g080020.2.1 | Tomato | extracellular, plasma membrane | 36.55 | 33.57 |
| KRH20901 | Soybean | vacuole | 35.25 | 33.5 |
| PGSC0003DMT400083215 | Potato | extracellular | 36.29 | 33.41 |
| KRH11388 | Soybean | plasma membrane, vacuole | 34.73 | 33.0 |
| KRH02113 | Soybean | endoplasmic reticulum, vacuole | 36.55 | 32.41 |
| CDY13973 | Canola | cytosol | 7.05 | 31.4 |
| CDX86682 | Canola | endoplasmic reticulum, vacuole | 33.42 | 30.84 |
| CDY15456 | Canola | endoplasmic reticulum, vacuole | 32.9 | 30.36 |
| CDY13967 | Canola | cytosol | 13.84 | 28.8 |
| CDY32500 | Canola | endoplasmic reticulum, vacuole | 32.64 | 28.8 |
| CDY13976 | Canola | cytosol | 6.79 | 28.57 |
| CDY15455 | Canola | endoplasmic reticulum, vacuole | 32.11 | 28.47 |
| CDY02584 | Canola | cytosol | 9.14 | 28.46 |
| CDY02589 | Canola | plastid | 20.63 | 28.32 |
| CDX83218 | Canola | extracellular, plastid | 29.24 | 27.72 |
| CDY47196 | Canola | extracellular | 29.24 | 27.65 |
| CDY30827 | Canola | extracellular, vacuole | 28.2 | 27.2 |
| CDX92557 | Canola | extracellular | 30.03 | 27.0 |
| CDY36265 | Canola | mitochondrion | 13.84 | 25.6 |
| CDY47198 | Canola | cytosol, nucleus, plasma membrane | 25.59 | 25.45 |
| CDX92555 | Canola | extracellular | 24.02 | 25.41 |
| CDY13961 | Canola | extracellular | 28.98 | 25.23 |
| CDY47197 | Canola | extracellular, plasma membrane | 25.59 | 25.19 |
| CDY70079 | Canola | extracellular, plasma membrane, vacuole | 28.98 | 25.11 |
| CDY13970 | Canola | extracellular, plasma membrane | 24.8 | 25.07 |
| CDY02588 | Canola | extracellular, plasma membrane | 25.85 | 24.94 |
| CDY13974 | Canola | extracellular | 18.28 | 24.22 |
| CDY37436 | Canola | endoplasmic reticulum, plasma membrane | 18.54 | 23.99 |
| CDX92556 | Canola | extracellular, plasma membrane | 25.33 | 23.32 |
| CDY13962 | Canola | extracellular, plasma membrane | 25.33 | 23.32 |
| CDY13972 | Canola | cytosol | 6.27 | 22.22 |
| CDY19949 | Canola | plasma membrane | 21.93 | 20.84 |
| CDY00058 | Canola | extracellular, plasma membrane | 21.93 | 20.84 |
| CDY13977 | Canola | plasma membrane | 15.14 | 20.07 |
| CDY21504 | Canola | extracellular | 27.15 | 18.18 |
| CDY02583 | Canola | plasma membrane | 9.92 | 11.14 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | GO:A0A078FM56 | UniProt:A0A078FM56 | InterPro:Aspartic_peptidase_A1 | EnsemblPlants:CDY13979 |
| ProteinID:CDY13979 | ProteinID:CDY13979.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00078484001 | InterPro:IPR021109 |
| InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 |
| PANTHER:PTHR13683:SF553 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N |
| UniParc:UPI0004EE1D86 | SEG:seg | : | : | : | : |
Description
BnaC09g38470DBnaC09g38470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FM56]
Coordinates
chrLK032039:+:588358..589586
Molecular Weight (calculated)
39948.8 Da
IEP (calculated)
5.159
GRAVY (calculated)
0.244
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MASCLNLLVF SFLSILLISN SQISDSVNGV VFPVTRDVHT GQYIAQILIG DSPEPVKLVV DLSGSLLWFD CSSGHVSSSR SLVSGSSSGC LKAKVGDERV
101: SRNAECDLLV RNGDVGIAAR GELARDVLSF GSVSSPGTAD ILFACAPPSL LRGLSSGAQG LMGLGKAQIS LPSQLAAQTN ERRRLTLYLS PSNGVVSTSS
201: VEDVFGVAAS KSLAYTPLSS GSSGSYVINV KSIRVGGKRL SVDGPLSVEL STVAPYTMLE SSVYTVLAEA YTKAATNAKS VSPVAPFSLC FTSSSEVDFP
301: AVDLSLQSEM VRWRIQGRNL MVDVGGGVRC LGIVDGGSNP VSPIIMGGLQ LEGFVLDFDL GNSMLGFGQR TRSTSESLQP ESL
101: SRNAECDLLV RNGDVGIAAR GELARDVLSF GSVSSPGTAD ILFACAPPSL LRGLSSGAQG LMGLGKAQIS LPSQLAAQTN ERRRLTLYLS PSNGVVSTSS
201: VEDVFGVAAS KSLAYTPLSS GSSGSYVINV KSIRVGGKRL SVDGPLSVEL STVAPYTMLE SSVYTVLAEA YTKAATNAKS VSPVAPFSLC FTSSSEVDFP
301: AVDLSLQSEM VRWRIQGRNL MVDVGGGVRC LGIVDGGSNP VSPIIMGGLQ LEGFVLDFDL GNSMLGFGQR TRSTSESLQP ESL
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.