Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19120.1 | KRH10294 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH23029 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH24840 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH29844 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11388 | Soybean | plasma membrane, vacuole | 89.33 | 89.33 |
| KRH51036 | Soybean | plasma membrane, vacuole | 56.82 | 55.31 |
| KRH02113 | Soybean | endoplasmic reticulum, vacuole | 56.82 | 53.01 |
| VIT_05s0020g02720.t01 | Wine grape | extracellular, plasma membrane | 39.21 | 43.17 |
| Solyc01g080020.2.1 | Tomato | extracellular, plasma membrane | 41.94 | 40.53 |
| PGSC0003DMT400083215 | Potato | extracellular | 41.69 | 40.38 |
| AT5G19120.1 | Thale cress | endoplasmic reticulum, vacuole | 36.48 | 38.08 |
| KRH71440 | Soybean | extracellular | 39.21 | 36.32 |
| CDX70865 | Canola | extracellular | 34.49 | 35.55 |
| CDX92553 | Canola | endoplasmic reticulum, vacuole | 33.5 | 35.53 |
| CDY13979 | Canola | endoplasmic reticulum, vacuole | 33.5 | 35.25 |
| CDX88901 | Canola | extracellular | 33.75 | 35.14 |
| CDY59021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 33.75 | 35.14 |
| Bra002214.1-P | Field mustard | endoplasmic reticulum, extracellular | 33.25 | 34.99 |
| KRH34381 | Soybean | endoplasmic reticulum, plasma membrane | 36.48 | 33.11 |
| KRG92423 | Soybean | nucleus | 35.73 | 32.88 |
| KRH32004 | Soybean | endoplasmic reticulum | 22.83 | 32.86 |
| KRH02114 | Soybean | nucleus | 36.23 | 32.44 |
| KRH11387 | Soybean | cytosol | 27.79 | 31.73 |
| KRH67173 | Soybean | nucleus | 33.5 | 31.62 |
| KRH51876 | Soybean | nucleus | 33.75 | 30.63 |
| KRH20900 | Soybean | extracellular, vacuole | 32.01 | 30.07 |
| KRH20899 | Soybean | endoplasmic reticulum | 34.74 | 29.6 |
| KRH68584 | Soybean | nucleus | 30.77 | 29.04 |
| KRH11386 | Soybean | endoplasmic reticulum | 30.27 | 28.98 |
| KRG96855 | Soybean | endoplasmic reticulum | 29.78 | 27.71 |
| CDY72428 | Canola | extracellular | 8.68 | 26.32 |
Protein Annotations
| EntrezGene:100807749 | MapMan:19.4.3.1 | Gene3D:2.40.70.10 | UniProt:A0A0R4J509 | EMBL:ACUP02008324 | InterPro:Aspartic_peptidase_A1 |
| EnsemblPlantsGene:GLYMA_13G208200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR021109 | InterPro:IPR033121 | EnsemblPlants:KRH20901 |
| ProteinID:KRH20901 | ProteinID:KRH20901.1 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 |
| PANTHER:PTHR13683 | PANTHER:PTHR13683:SF553 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C |
| InterPro:TAXi_N | UniParc:UPI00018C6C52 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:32176890..32179471
Molecular Weight (calculated)
43371.7 Da
IEP (calculated)
6.573
GRAVY (calculated)
0.006
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSLFLSL SLTLCLVSSL CYAHKSSLTL PVTKDDSTHQ YLTTLSYGTP VESAKFVLDL GGSILWADCA SRTTPSSTLA PIFHRSIRCL TAKGPEIETH
101: RWLSSLANPI DQDQPCQIPA ENSISGKRVT EGELVEDLVI NRSHELLFTC SPTLLLNGLA TGAKGMVGLD RSRTSFSSQV FHSLGTQRKI TLCLSSSSGI
201: VQFGNVAHES QPGSEIFRSL TFTPLVANQD QTQTHPSINV NSVKINGKKV SFDTPLGGGA QLSTVVPYTT LQTSIYANFE SAYLKAASSM SMKRVDPVSP
301: FGLCFESNGV GSSQVGPNVP VIDLVLQSEM VKWSIHGRNS MVQVNDDVMC LGFVDGGENP RNPIVIGGYQ LEDVLVQIDF DTSMVGFSPS LLTKHATCSH
401: FKP
101: RWLSSLANPI DQDQPCQIPA ENSISGKRVT EGELVEDLVI NRSHELLFTC SPTLLLNGLA TGAKGMVGLD RSRTSFSSQV FHSLGTQRKI TLCLSSSSGI
201: VQFGNVAHES QPGSEIFRSL TFTPLVANQD QTQTHPSINV NSVKINGKKV SFDTPLGGGA QLSTVVPYTT LQTSIYANFE SAYLKAASSM SMKRVDPVSP
301: FGLCFESNGV GSSQVGPNVP VIDLVLQSEM VKWSIHGRNS MVQVNDDVMC LGFVDGGENP RNPIVIGGYQ LEDVLVQIDF DTSMVGFSPS LLTKHATCSH
401: FKP
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.