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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • plastid 3
  • endoplasmic reticulum 2
  • plasma membrane 3
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 nucleus: 21132161
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH20900 Soybean extracellular, vacuole 58.77 64.8
KRH51876 Soybean nucleus 55.6 59.23
KRH02114 Soybean nucleus 42.92 45.11
KRH11387 Soybean cytosol 31.29 41.93
CDY13973 Canola cytosol 7.61 41.86
CDY02584 Canola cytosol 10.78 41.46
KRH71440 Soybean extracellular 36.79 40.0
KRH11386 Soybean endoplasmic reticulum 34.25 38.48
AT5G19100.1 Thale cress endoplasmic reticulum, vacuole 30.87 37.34
CDY02589 Canola plastid 21.99 37.28
CDY13967 Canola cytosol 14.38 36.96
Bra023703.1-P Field mustard extracellular 31.29 36.54
Bra002210.1-P Field mustard extracellular 32.56 36.41
CDX92557 Canola extracellular 32.77 36.38
CDY47196 Canola extracellular 31.08 36.3
KRH32004 Soybean endoplasmic reticulum 20.93 35.36
KRH11388 Soybean plasma membrane, vacuole 30.02 35.24
CDY13961 Canola extracellular 32.77 35.23
CDY70079 Canola extracellular, plasma membrane, vacuole 32.56 34.84
CDY30827 Canola extracellular, vacuole 29.18 34.76
KRH20901 Soybean vacuole 29.6 34.74
Bra034134.1-P Field mustard extracellular, plasma membrane 29.39 34.15
KRG92423 Soybean nucleus 31.29 33.79
CDY47198 Canola cytosol, nucleus, plasma membrane 27.48 33.77
CDX83218 Canola extracellular, plastid 28.75 33.66
Bra023705.1-P Field mustard cytosol, plasma membrane, plastid 27.27 33.51
Bra000556.1-P Field mustard extracellular, plastid 28.54 33.42
CDY13972 Canola cytosol 7.61 33.33
KRH34381 Soybean endoplasmic reticulum, plasma membrane 31.29 33.33
KRH51036 Soybean plasma membrane, vacuole 28.96 33.09
KRH02113 Soybean endoplasmic reticulum, vacuole 29.81 32.64
AT5G19110.2 Thale cress plastid 30.23 32.43
KRH67173 Soybean nucleus 28.96 32.08
CDY13970 Canola extracellular, plasma membrane 24.95 31.13
Bra023704.1-P Field mustard extracellular, plasma membrane 25.16 30.59
KRH68584 Soybean nucleus 27.48 30.45
CDY47197 Canola extracellular, plasma membrane 24.95 30.33
CDY02588 Canola extracellular, plasma membrane 25.37 30.23
Bra002211.1-P Field mustard extracellular, plasma membrane 26.43 30.05
CDX92556 Canola extracellular, plasma membrane 26.43 30.05
Bra002212.1-P Field mustard extracellular 22.83 30.0
CDY13976 Canola cytosol 5.71 29.67
CDY13962 Canola extracellular, plasma membrane 26.0 29.57
CDY36265 Canola mitochondrion 12.9 29.47
KRG96855 Soybean endoplasmic reticulum 26.85 29.33
CDX92555 Canola extracellular 22.2 29.01
CDY13974 Canola extracellular 17.55 28.72
CDY13977 Canola plasma membrane 16.7 27.34
CDY21504 Canola extracellular 26.0 21.5
CDY02583 Canola plasma membrane 10.57 14.66
Protein Annotations
EntrezGene:100807221MapMan:19.4.3.1Gene3D:2.40.70.10EMBL:ACUP02008324InterPro:Aspartic_peptidase_A1EnsemblPlantsGene:GLYMA_13G208000
GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019538
GO:GO:0030163UniProt:I1M138InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KRH20899ProteinID:KRH20899
ProteinID:KRH20899.1InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683
PANTHER:PTHR13683:SF268InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630InterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelix
UniParc:UPI000233BF16SEG:seg::::
Description
hypothetical protein
Coordinates
chr13:+:32166520..32168409
Molecular Weight (calculated)
51194.8 Da
IEP (calculated)
8.066
GRAVY (calculated)
0.075
Length
473 amino acids
Sequence
(BLAST)
001: MMNKITCPHA PCIPCYKSET QHCELNTPTH PFIVLMLAMS SSFSIHFFLL LSIALFSVCC LAASQAPTTK SHPYILPIKK DPATNLYYTS VGIGTPRHNF
101: DLVIDLSGEN LWYDCDTHYN SSSYRPIACG SKQCPEIGCV GCNGPFKPGC TNNTCPANVI NQLAKFIYSG GLGEDFIFIR QNKVSGLLSS CIDTDAFPSF
201: SDDELPLFGL PNNTKGIIGL SKSQLALPIQ LASANKVPSK FSLCLPSLNN QGFTNLLVRA GEEHPQGISK FLKTTPLIVN NVSTGAISVE GVPSKEYFID
301: VKAVQIDGNV VNLKPSLLAI DNKGNGGTKL STMSPFTELQ TTVYKTFIRD FIKKASDRRL KRVASVAPFE ACYDSTSIRN SSTGLVVPTI DLVLRGGVQW
401: TIYGANSMVM AKKNVACLAI VDGGTEPRMS FVKASIVIGG YQLEDNLLEF DVASSKLSFS SSLLLHNATC SRT
Best Arabidopsis Sequence Match ( AT5G19100.1 )
(BLAST)
001: MAPRVIFLLL SLVFLYLANT SHSLRKFQSF LHPIYKDTAK NIYTIPLSIG STSSEKFVLD LNGAAPLLQN CPTAAKSTTY HPIRCGSTRC KYANPNFPCP
101: NNVIAKKRTV CLSSDNSRLF RDTVPLLYTF NGVYTRDSEM SSSLTLTCTD GAPALKQRTI GLANTHLSIP SQLISMYQLP HKIALCLPST ERSQSHNGDL
201: WIGKGEYYYL PYDKDVSKIF ASTPLIGNGK SGEYLIDVKS IQIGAKTVPI PYGATKISTL APYTVFQTSL YKALLTAFTE NIKIAKAPAV KPFGACFYSN
301: GGRGVPVIDL VLSGGAKWRI YGSNSLVKVN KNVVCLGFVD GGVKPKYPIV IGGFQMEDNL VEFDLEASKF SFSSSLLLHN TSCSVQRLSP F
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q3E9C8]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.