Factsheet for Bra000556.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 1
plastid 3
extracellular 3
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83218	Canola	extracellular, plastid	99.01	99.01
CDY21504	Canola	extracellular	92.08	65.03
Bra023703.1-P	Field mustard	extracellular	57.92	57.78
Bra034134.1-P	Field mustard	extracellular, plasma membrane	40.59	40.29
KRH11387	Soybean	cytosol	30.69	35.13
KRH02114	Soybean	nucleus	37.38	33.56
Bra002210.1-P	Field mustard	extracellular	33.91	32.39
Bra030526.1-P	Field mustard	plasma membrane, vacuole	32.43	31.64
KRH20900	Soybean	extracellular, vacuole	33.42	31.47
Bra032555.1-P	Field mustard	endoplasmic reticulum, vacuole	33.42	31.25
KRH51876	Soybean	nucleus	33.91	30.86
KRH11386	Soybean	endoplasmic reticulum	31.44	30.17
Bra023705.1-P	Field mustard	cytosol, plasma membrane, plastid	27.97	29.35
Bra030525.1-P	Field mustard	extracellular, vacuole	31.68	28.57
KRH20899	Soybean	endoplasmic reticulum	33.42	28.54
Bra002214.1-P	Field mustard	endoplasmic reticulum, extracellular	25.5	26.89
Bra023704.1-P	Field mustard	extracellular, plasma membrane	25.74	26.74
Bra002212.1-P	Field mustard	extracellular	23.76	26.67
Bra002211.1-P	Field mustard	extracellular, plasma membrane	26.49	25.72
Bra036172.1-P	Field mustard	extracellular, plasma membrane	25.5	25.56

Protein Annotations

Gene3D:2.40.70.10	MapMan:35.1	InterPro:Aspartic_peptidase_A1	EnsemblPlantsGene:Bra000556	EnsemblPlants:Bra000556.1	EnsemblPlants:Bra000556.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M4C8M8	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF268	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI00025400B5	SEG:seg

Description

AT5G19100 (E=8e-099) | extracellular dermal glycoprotein-related / EDGP-related

Coordinates

chrA03:+:11759201..11760415

Molecular Weight (calculated)

43737.6 Da

IEP (calculated)

9.585

GRAVY (calculated)

0.204

Length

404 amino acids

Sequence
(BLAST)

001: MIHVLCVIIF AITNTSHSLH EKPQAFLQAI RKDITTNLYY SPLSIGANVH NINLAIDLGG SAPLLLTCAA AAKSRSYHPI KCGSSRCIQA KPDPVSCPTN
101: TSKKATCHKS FSTSFTEQPV KARLLRDTVS LLYTDNGFTY MGGGIDMTMT IACTDVKPFP SIVVGTLGLA KTHMALPSQI VSLYKLPFKV ALCLPSPNSG
201: ESSGSGSLFI GGGPYFMALY PEDISKIFAS TPLLPSDQSR GEYFIDVNYI QISGKIVPFF KKSTKICTLA PYTVLHSSIY KALVLAFAEK AKMTKVPAVK
301: PFASCFSSKG LGRWMMGSRV PVIELLLRGG AKWKIYGSNS LVKVSKDVVC LGFMDGGVNL TMGMIIGGYQ MEDNFVEFDV KASKFSFTSS LLLINSSCSQ
401: SRHF

Best Arabidopsis Sequence Match ( AT5G19100.1 )
(BLAST)

001: MAPRVIFLLL SLVFLYLANT SHSLRKFQSF LHPIYKDTAK NIYTIPLSIG STSSEKFVLD LNGAAPLLQN CPTAAKSTTY HPIRCGSTRC KYANPNFPCP
101: NNVIAKKRTV CLSSDNSRLF RDTVPLLYTF NGVYTRDSEM SSSLTLTCTD GAPALKQRTI GLANTHLSIP SQLISMYQLP HKIALCLPST ERSQSHNGDL
201: WIGKGEYYYL PYDKDVSKIF ASTPLIGNGK SGEYLIDVKS IQIGAKTVPI PYGATKISTL APYTVFQTSL YKALLTAFTE NIKIAKAPAV KPFGACFYSN
301: GGRGVPVIDL VLSGGAKWRI YGSNSLVKVN KNVVCLGFVD GGVKPKYPIV IGGFQMEDNL VEFDLEASKF SFSSSLLLHN TSCSVQRLSP F

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q3E9C8]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.