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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY02584 Canola cytosol 13.33 48.78
KRH71440 Soybean extracellular 46.0 47.59
KRH11387 Soybean cytosol 36.67 46.74
KRH20900 Soybean extracellular, vacuole 44.0 46.15
KRH32004 Soybean endoplasmic reticulum 27.78 44.64
CDY13973 Canola cytosol 8.44 44.19
KRH51876 Soybean nucleus 43.11 43.69
CDY02589 Canola plastid 26.89 43.37
KRH20899 Soybean endoplasmic reticulum 45.11 42.92
KRG92423 Soybean nucleus 40.0 41.1
KRH11386 Soybean endoplasmic reticulum 38.0 40.62
AT5G19100.1 Thale cress endoplasmic reticulum, vacuole 35.11 40.41
CDX92557 Canola extracellular 37.33 39.44
Bra002210.1-P Field mustard extracellular 36.89 39.24
CDY13967 Canola cytosol 16.0 39.13
KRH34381 Soybean endoplasmic reticulum, plasma membrane 38.44 38.96
Bra023703.1-P Field mustard extracellular 34.67 38.52
CDY30827 Canola extracellular, vacuole 33.78 38.29
CDY47196 Canola extracellular 34.44 38.27
Bra023705.1-P Field mustard cytosol, plasma membrane, plastid 32.67 38.18
CDY13961 Canola extracellular 37.11 37.95
CDY47198 Canola cytosol, nucleus, plasma membrane 32.44 37.92
CDY70079 Canola extracellular, plasma membrane, vacuole 37.11 37.78
CDX83218 Canola extracellular, plastid 33.78 37.62
Bra000556.1-P Field mustard extracellular, plastid 33.56 37.38
KRH51036 Soybean plasma membrane, vacuole 34.0 36.96
KRH11388 Soybean plasma membrane, vacuole 32.89 36.72
CDY13976 Canola cytosol 7.33 36.26
KRH20901 Soybean vacuole 32.44 36.23
CDY13972 Canola cytosol 8.67 36.11
KRH02113 Soybean endoplasmic reticulum, vacuole 34.0 35.42
KRH67173 Soybean nucleus 33.11 34.89
Bra034134.1-P Field mustard extracellular, plasma membrane 31.33 34.64
AT5G19110.2 Thale cress plastid 33.56 34.24
CDY13970 Canola extracellular, plasma membrane 27.78 32.98
Bra002212.1-P Field mustard extracellular 26.22 32.78
CDY02588 Canola extracellular, plasma membrane 28.67 32.49
CDY13962 Canola extracellular, plasma membrane 29.56 31.97
CDX92556 Canola extracellular, plasma membrane 29.56 31.97
CDY47197 Canola extracellular, plasma membrane 27.56 31.88
Bra002211.1-P Field mustard extracellular, plasma membrane 29.33 31.73
Bra023704.1-P Field mustard extracellular, plasma membrane 27.33 31.62
CDX92555 Canola extracellular 25.33 31.49
KRH68584 Soybean nucleus 29.56 31.15
CDY36265 Canola mitochondrion 14.22 30.92
KRG96855 Soybean endoplasmic reticulum 29.33 30.48
CDY13974 Canola extracellular 19.56 30.45
CDY13977 Canola plasma membrane 17.56 27.34
CDY21504 Canola extracellular 31.11 24.48
CDY02583 Canola plasma membrane 10.89 14.37
Protein Annotations
EntrezGene:100818868MapMan:19.4.3.1Gene3D:2.40.70.10EMBL:ACUP02010293InterPro:Aspartic_peptidase_A1EMBL:BT097610
UniProt:C6TIX1EnsemblPlantsGene:GLYMA_17G016600GO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016787GO:GO:0019538GO:GO:0030163
InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KRH02114ProteinID:KRH02114ProteinID:KRH02114.1InterPro:PEPTIDASE_A1
PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF268InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0001B16E0C
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr17:-:1229193..1231071
Molecular Weight (calculated)
48672.9 Da
IEP (calculated)
8.652
GRAVY (calculated)
0.097
Length
450 amino acids
Sequence
(BLAST)
001: MVTCPGSIII HFFLFSAPLL SVLWSCSSVS ALKPRAFILP IEKDPTTLQY STSIDMGTPP LTLDLVIDIR ERFLWFECGN DYNSSTYYPV RCGTKKCKKA
101: KGTACITCTN HPLKTGCTNN TCGVDPFNPF GEFFVSGDVG EDILSSLHST SGARAPSTLH VPRFVSTCVY PDKFGVEGFL QGLAKGKKGV LGLARTAISL
201: PTQLAAKYNL EPKFALCLPS TSKYNKLGDL FVGGGPYYLP PHDASKFLSY TPILTNPQST GPIFDADPSS EYFIDVKSIK LDGKIVNVNT SLLSIDRQGN
301: GGCKLSTVVP YTKFHTSIYQ PLVNDFVKQA ALRKIKRVTS VAPFGACFDS RTIGKTVTGP NVPTIDLVLK GGVQWRIYGA NSMVKVSKNV LCLGFVDGGL
401: EPGSPIATSI VIGGYQMEDN LLEFDLVSSK LGFSSSLLLH MASCSHFRLV
Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)
001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA
Arabidopsis Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.