CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 1
peroxisome 3
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71440	Soybean	extracellular	84.64	54.48
VIT_07s0104g00180.t01	Wine grape	endoplasmic reticulum, extracellular	65.71	42.2
AT1G03220.1	Thale cress	endoplasmic reticulum, vacuole	57.86	37.41
CDX86682	Canola	endoplasmic reticulum, vacuole	54.29	36.63
CDY15456	Canola	endoplasmic reticulum, vacuole	54.29	36.63
Bra032555.1-P	Field mustard	endoplasmic reticulum, vacuole	55.71	36.11
CDY32500	Canola	endoplasmic reticulum, vacuole	55.71	35.94
Bra030526.1-P	Field mustard	plasma membrane, vacuole	52.86	35.75
CDY37437	Canola	mitochondrion, plastid	15.0	35.59
AT1G03230.1	Thale cress	plasma membrane, vacuole	54.29	35.02
CDY15455	Canola	endoplasmic reticulum, vacuole	53.57	34.72
KRG92423	Soybean	nucleus	53.93	34.47
KRH34381	Soybean	endoplasmic reticulum, plasma membrane	54.64	34.46
Bra030525.1-P	Field mustard	extracellular, vacuole	55.0	34.38
HORVU1Hr1G061380.1	Barley	extracellular, golgi	47.5	30.93
TraesCS1D01G251700.1	Wheat	extracellular, golgi	47.5	30.5
TraesCS1B01G263100.1	Wheat	endoplasmic reticulum, extracellular	47.14	30.34
TraesCS1A01G251900.1	Wheat	endoplasmic reticulum, extracellular	47.14	30.34
Os05t0402900-01	Rice	extracellular	47.14	30.21
Zm00001d038151_P001	Maize	extracellular	46.79	29.91
Os05t0403000-01	Rice	extracellular	46.07	29.52
Os05t0403300-01	Rice	golgi	47.86	29.45
CDY37436	Canola	endoplasmic reticulum, plasma membrane	31.07	29.39
OQU77960	Sorghum	endoplasmic reticulum, extracellular	47.14	29.33
Solyc01g080000.1.1	Tomato	extracellular	45.0	28.31
KRH02114	Soybean	nucleus	44.64	27.78
PGSC0003DMT400023184	Potato	extracellular, vacuole	43.21	27.25
KRH11387	Soybean	cytosol	33.21	26.35
KRH51036	Soybean	plasma membrane, vacuole	38.57	26.09
GSMUA_Achr8P09510_001	Banana	endoplasmic reticulum, extracellular	25.0	25.93
Os05t0403100-00	Rice	extracellular	30.71	24.64
KRH02113	Soybean	endoplasmic reticulum, vacuole	37.86	24.54
KRH11388	Soybean	plasma membrane, vacuole	33.21	23.08
KRH68584	Soybean	nucleus	35.0	22.95
KRH20901	Soybean	vacuole	32.86	22.83
KRH67173	Soybean	nucleus	34.64	22.72
KRH51876	Soybean	nucleus	35.71	22.52
KRG96855	Soybean	endoplasmic reticulum	34.64	22.4
KRH20900	Soybean	extracellular, vacuole	34.29	22.38
KRH11386	Soybean	endoplasmic reticulum	31.79	21.14
KRH20899	Soybean	endoplasmic reticulum	35.36	20.93

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EMBL:ACUP02006092	InterPro:Aspartic_peptidase_A1	EnsemblPlantsGene:GLYMA_10G025600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	UniProt:K7LH14	EnsemblPlants:KRH32004
ProteinID:KRH32004	ProteinID:KRH32004.1	PFAM:PF14541	PFAM:PF14543	PANTHER:PTHR13683	PANTHER:PTHR13683:SF532
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI000294C20B	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:2221247..2222820

Molecular Weight (calculated)

30094.2 Da

IEP (calculated)

8.562

GRAVY (calculated)

0.314

Length

280 amino acids

Sequence
(BLAST)

001: MCGELAEDVV SLQSTNGFNP KQNATVSRFL FACAPTFLLQ GLATDVSGMA GLGRTKIALP SQFASAFSFR RKFAVCLSSS NGVAFFGDGP YVLLPNVDAS
101: QLLTFTPLLL NPVSTASAFA LGEPSAEYFI GVKSIKIDEK SVRVNTTLLS INSSGVGGTK ISSVNPYTVL EASIFKAVTE AFVKASAARN ITRVASVAPF
201: EVCFSSENVV ATRLGAAVPT IELVLQNQKT VWRIYIWSKL DAEDLDCNWK TIFCMATSRL GFSSLLYGSR TTCSNFYCRI

Best Arabidopsis Sequence Match ( AT1G03220.1 )
(BLAST)

001: MAPSPIIFSV LLLFIFSLSS SAQTPFRPKA LLLPVTKDQS TLQYTTVINQ RTPLVPASVV FDLGGRELWV DCDKGYVSST YQSPRCNSAV CSRAGSTSCG
101: TCFSPPRPGC SNNTCGGIPD NTVTGTATSG EFALDVVSIQ STNGSNPGRV VKIPNLIFDC GATFLLKGLA KGTVGMAGMG RHNIGLPSQF AAAFSFHRKF
201: AVCLTSGKGV AFFGNGPYVF LPGIQISSLQ TTPLLINPVS TASAFSQGEK SSEYFIGVTA IQIVEKTVPI NPTLLKINAS TGIGGTKISS VNPYTVLESS
301: IYNAFTSEFV KQAAARSIKR VASVKPFGAC FSTKNVGVTR LGYAVPEIEL VLHSKDVVWR IFGANSMVSV SDDVICLGFV DGGVNARTSV VIGGFQLEDN
401: LIEFDLASNK FGFSSTLLGR QTNCANFNFT STA

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZVS4]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.