Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G19120.1 | KRH10294 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH23029 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH24840 | AT3G46090.1 | 17259181 |
| AT5G19120.1 | KRH29844 | AT3G46090.1 | 17259181 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH02113 | Soybean | endoplasmic reticulum, vacuole | 88.89 | 85.19 |
| KRH20901 | Soybean | vacuole | 55.31 | 56.82 |
| KRH11388 | Soybean | plasma membrane, vacuole | 52.66 | 54.09 |
| VIT_05s0020g02720.t01 | Wine grape | extracellular, plasma membrane | 42.51 | 48.09 |
| PGSC0003DMT400083215 | Potato | extracellular | 46.38 | 46.15 |
| Solyc01g080020.2.1 | Tomato | extracellular, plasma membrane | 45.17 | 44.84 |
| KRH71440 | Soybean | extracellular | 45.89 | 43.68 |
| KRH32004 | Soybean | endoplasmic reticulum | 26.09 | 38.57 |
| AT5G19120.1 | Thale cress | endoplasmic reticulum, vacuole | 35.75 | 38.34 |
| CDX92553 | Canola | endoplasmic reticulum, vacuole | 34.78 | 37.89 |
| CDX70865 | Canola | extracellular | 35.75 | 37.85 |
| Bra002214.1-P | Field mustard | endoplasmic reticulum, extracellular | 34.78 | 37.6 |
| CDX88901 | Canola | extracellular | 35.02 | 37.47 |
| CDY59021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.78 | 37.21 |
| CDY13979 | Canola | endoplasmic reticulum, vacuole | 34.3 | 37.08 |
| KRG92423 | Soybean | nucleus | 38.65 | 36.53 |
| KRH34381 | Soybean | endoplasmic reticulum, plasma membrane | 37.92 | 35.36 |
| KRH11387 | Soybean | cytosol | 29.47 | 34.56 |
| KRH02114 | Soybean | nucleus | 36.96 | 34.0 |
| KRH67173 | Soybean | nucleus | 34.78 | 33.72 |
| KRH20900 | Soybean | extracellular, vacuole | 32.85 | 31.7 |
| CDY72428 | Canola | extracellular | 10.14 | 31.58 |
| KRH68584 | Soybean | nucleus | 32.37 | 31.38 |
| KRH51876 | Soybean | nucleus | 32.85 | 30.63 |
| KRH11386 | Soybean | endoplasmic reticulum | 30.68 | 30.17 |
| KRG96855 | Soybean | endoplasmic reticulum | 31.4 | 30.02 |
| KRH20899 | Soybean | endoplasmic reticulum | 33.09 | 28.96 |
Protein Annotations
| EntrezGene:100806719 | MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EMBL:ACUP02004727 | InterPro:Aspartic_peptidase_A1 | EMBL:BT098317 |
| UniProt:C6TKU7 | EnsemblPlantsGene:GLYMA_07G257500 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
| InterPro:IPR021109 | InterPro:IPR033121 | EnsemblPlants:KRH51036 | ProteinID:KRH51036 | ProteinID:KRH51036.1 | InterPro:PEPTIDASE_A1 |
| PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF553 | InterPro:Peptidase_aspartic_dom_sf |
| SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI00018C6C70 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:43364729..43366689
Molecular Weight (calculated)
44785.7 Da
IEP (calculated)
6.981
GRAVY (calculated)
0.132
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYSIPLIIT FFFFLFGTLS HAQAPASFLI PVTKDASTLQ YITTLSYGTP LVPTPLVLDL GGPFLWLHCA SRNTPSSSSL TTPHRSLQCF TAKTHKSTNS
101: FLSSPVDEVD QYQPCQVFPE NSITGTIAAE GELVEDLMAL QSAKEKGQLV EHQSRFTCSP TTLLHGLAKG ARGMVGLGRS RSSLPSQVFD NFSTHRKLTL
201: CLSSSKGVVL LGNVATYESE VLKSLTFTPL VTSFPTQEYF INVNSVKING KRLSNEHEGG GGVLTLLSTI VPYTTMQSSI YNSFKTSFED AAVAMNITRV
301: ASVAPFELCF SSRGSQVGPS MPVIELVLQS EMVKWTIHGR NSMVRVSDEV LCLGFLDGGV NPRNSIVIGG YQLEDVIVQF DLATSMVGFS SSLVAKNTKC
401: SDFKYASSIT ADSI
101: FLSSPVDEVD QYQPCQVFPE NSITGTIAAE GELVEDLMAL QSAKEKGQLV EHQSRFTCSP TTLLHGLAKG ARGMVGLGRS RSSLPSQVFD NFSTHRKLTL
201: CLSSSKGVVL LGNVATYESE VLKSLTFTPL VTSFPTQEYF INVNSVKING KRLSNEHEGG GGVLTLLSTI VPYTTMQSSI YNSFKTSFED AAVAMNITRV
301: ASVAPFELCF SSRGSQVGPS MPVIELVLQS EMVKWTIHGR NSMVRVSDEV LCLGFLDGGV NPRNSIVIGG YQLEDVIVQF DLATSMVGFS SSLVAKNTKC
401: SDFKYASSIT ADSI
001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL
Arabidopsis Description
AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.