CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59021	Canola	endoplasmic reticulum, extracellular, plasma membrane	95.87	95.87
CDY72428	Canola	extracellular	29.46	85.71
CDX70865	Canola	extracellular	86.3	85.42
CDX92553	Canola	endoplasmic reticulum, vacuole	76.23	77.63
CDY13979	Canola	endoplasmic reticulum, vacuole	75.97	76.76
AT5G19120.1	Thale cress	endoplasmic reticulum, vacuole	76.23	76.42
VIT_05s0020g02720.t01	Wine grape	extracellular, plasma membrane	36.95	39.07
KRH51036	Soybean	plasma membrane, vacuole	37.47	35.02
PGSC0003DMT400083215	Potato	extracellular	36.95	34.38
Solyc01g080020.2.1	Tomato	extracellular, plasma membrane	36.69	34.05
CDY37437	Canola	mitochondrion, plastid	10.34	33.9
KRH20901	Soybean	vacuole	35.14	33.75
KRH11388	Soybean	plasma membrane, vacuole	34.63	33.25
KRH02113	Soybean	endoplasmic reticulum, vacuole	36.95	33.1
CDX86682	Canola	endoplasmic reticulum, vacuole	33.85	31.57
CDY15456	Canola	endoplasmic reticulum, vacuole	33.59	31.33
CDY32500	Canola	endoplasmic reticulum, vacuole	33.33	29.72
CDY15455	Canola	endoplasmic reticulum, vacuole	32.56	29.17
CDY13967	Canola	cytosol	13.18	27.72
CDY02584	Canola	cytosol	8.79	27.64
CDY37436	Canola	endoplasmic reticulum, plasma membrane	20.93	27.36
CDY02589	Canola	plastid	19.38	26.88
CDY13973	Canola	cytosol	5.94	26.74
CDY13976	Canola	cytosol	6.2	26.37
CDY47196	Canola	extracellular	26.87	25.68
CDY36265	Canola	mitochondrion	13.7	25.6
CDX92555	Canola	extracellular	23.77	25.41
CDX92557	Canola	extracellular	27.91	25.35
CDX83218	Canola	extracellular, plastid	26.36	25.25
CDY47197	Canola	extracellular, plasma membrane	24.81	24.68
CDY13970	Canola	extracellular, plasma membrane	24.03	24.54
CDY30827	Canola	extracellular, vacuole	25.06	24.43
CDY47198	Canola	cytosol, nucleus, plasma membrane	24.29	24.42
CDY13974	Canola	extracellular	18.09	24.22
CDY02588	Canola	extracellular, plasma membrane	24.81	24.18
CDY13961	Canola	extracellular	27.39	24.09
CDY70079	Canola	extracellular, plasma membrane, vacuole	27.39	23.98
CDY13972	Canola	cytosol	6.2	22.22
CDX92556	Canola	extracellular, plasma membrane	23.51	21.88
CDY13962	Canola	extracellular, plasma membrane	23.51	21.88
CDY13977	Canola	plasma membrane	15.76	21.11
CDY19949	Canola	plasma membrane	21.96	21.09
CDY00058	Canola	extracellular, plasma membrane	21.96	21.09
CDY21504	Canola	extracellular	25.06	16.96
CDY02583	Canola	plasma membrane	9.3	10.56

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078DI32	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDX88901	ProteinID:CDX88901
ProteinID:CDX88901.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00148993001	InterPro:IPR021109	InterPro:IPR033121
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF553
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix
UniParc:UPI0004EEAF2A	SEG:seg	:	:	:	:

Description

BnaA03g07480D

Coordinates

chrLK031856:-:1504126..1505289

Molecular Weight (calculated)

40463.5 Da

IEP (calculated)

5.197

GRAVY (calculated)

0.254

Length

387 amino acids

Sequence
(BLAST)

001: MASSSSCLYL SVFTFLSVFL ITKSQISYSV NGIVFPVTRD LLTGQYVAEI RLGDSSEPVK LVVDLAGPLL WFDCSSGHIS SSRSLISGSS SGCLKAKAGN
101: DRALTRGDKN ADCDLLVRNG VVGITARGEL AADVLSLGSV SSQGTVDLLF ACAPPLLLRG LASGAQGVMG LGKAQISLPS QLAAETNERR RLTVYLSPSN
201: GVVSTSSVEE VFGTAAARSL VYTPLSTSSS GDYLINVKSI RVNGEKLAAK GPLSAELSTL VPYTTLESSL YAVFAEGYVK AATNAKSVAP VAPFGLCFTS
301: TSPDEVEFPA VELALQSEMV RWRIDGKNLL VDVGGGVQCL GIVNGGSNRV SPITMGGLQL EGFVLDFDLG NSMMGFGQRN SFRPEAL

Best Arabidopsis Sequence Match ( AT5G19120.1 )
(BLAST)

001: MASSSCLNLF FFSFLSALII SKSQISDSVN GVVFPVVKDL PTGQYLAQIR LGDSPDPVKL VVDLAGSILW FDCSSRHVSS SRNLISGSSS GCLKAKVGNE
101: RVSSSSSSRK DQNADCELLV KNDAFGITAR GELFSDVMSV GSVTSPGTVD LLFACTPPWL LRGLASGAQG VMGLGRAQIS LPSQLAAETN ERRRLTVYLS
201: PLNGVVSTSS VEEVFGVAAS RSLVYTPLLT GSSGNYVINV KSIRVNGEKL SVEGPLAVEL STVVPYTILE SSIYKVFAEA YAKAAGEATS VPPVAPFGLC
301: FTSDVDFPAV DLALQSEMVR WRIHGKNLMV DVGGGVRCSG IVDGGSSRVN PIVMGGLQLE GFILDFDLGN SMMGFGQRTR SDSTSL

Arabidopsis Description

AT5g19120/T24G5_20 [Source:UniProtKB/TrEMBL;Acc:Q93VG3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.