CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
peroxisome 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97521
KRH10294
KRH23029
KRH24840
KRH29844
KRH31353

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G06050.1	KRG97521	AT1G13030.1	21798944
AT2G06050.1	KRH31353	AT1G13030.1	21798944
AT2G06050.1	KRH10294	AT3G46090.1	17259181
AT2G06050.1	KRH23029	AT3G46090.1	17259181
AT2G06050.1	KRH24840	AT3G46090.1	17259181
AT2G06050.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02618	Soybean	mitochondrion	91.24	92.91
KRH19303	Soybean	nucleus	83.25	81.16
KRH02619	Soybean	nucleus	82.22	80.15
VIT_11s0016g01230.t01	Wine grape	plastid	72.94	71.11
Solyc07g007870.2.1	Tomato	plastid	71.13	69.7
AT2G06050.1	Thale cress	cytosol, plastid	68.81	68.29
PGSC0003DMT400079356	Potato	plastid	70.36	68.25
GSMUA_Achr7P02310_001	Banana	mitochondrion	60.05	67.93
Bra013161.1-P	Field mustard	peroxisome	68.04	67.87
Os08t0459600-01	Rice	cytosol	68.81	67.77
CDY50415	Canola	peroxisome	67.78	67.61
CDX93099	Canola	peroxisome	67.78	67.61
TraesCS7D01G405500.1	Wheat	golgi	67.27	66.92
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	67.27	66.92
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	67.01	66.67
EES13971	Sorghum	peroxisome, plastid	68.56	66.17
Zm00001d032049_P002	Maize	extracellular, mitochondrion	68.04	66.17
Zm00001d050107_P001	Maize	extracellular, mitochondrion	67.78	65.91
TraesCS5B01G487600.1	Wheat	mitochondrion	61.34	62.47
HORVU7Hr1G095960.1	Barley	plastid	67.78	54.34
KRG94044	Soybean	cytosol	51.03	54.25
KRH27669	Soybean	mitochondrion, plastid	51.29	53.64
KRH13220	Soybean	mitochondrion, peroxisome, plastid	49.23	52.91
KRH20560	Soybean	mitochondrion	48.45	51.23
KRH77822	Soybean	nucleus	52.06	50.25
KRH51591	Soybean	cytosol	48.2	49.87
KRH05151	Soybean	nucleus	43.04	47.44
KRH63555	Soybean	mitochondrion	9.28	46.75
KRH17523	Soybean	cytosol	46.39	45.8
KRH51594	Soybean	cytosol	7.22	35.9
KRH06010	Soybean	mitochondrion	15.21	33.52

Protein Annotations

EntrezGene:100796758	MapMan:11.7.1.6	Gene3D:3.20.20.70	UniProt:A0A0R0GV25	EMBL:ACUP02008171	InterPro:Aldolase_TIM
EnsemblPlantsGene:GLYMA_13G109800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	EnsemblPlants:KRH19304
ProteinID:KRH19304	ProteinID:KRH19304.1	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF67
SUPFAM:SSF51395	UniParc:UPI000188DFED	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:22363970..22366279

Molecular Weight (calculated)

42938.8 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.231

Length

388 amino acids

Sequence
(BLAST)

001: MADNSISLFS PYNKMGKFNL SHRVVLAPMT RCRALNGTPL AAHAEYYAQR STPGGFLITE GTLISPTSSG FPHVPGIYSD EQVEAWRNVV DAVHANGSFI
101: FCQLWHVGRA SHPVYQPGGA LPSSSTSKPI SDKWKILMPD GSHGIYPEPR ALTTSEISEI VHHYRQAAIN AIRAGFDGIE IHGAHGYLID QFLKDAINDR
201: TDEYGGPLEN RCRFLMEVVE AVVSAIGAER VAIRISPAID FNDAFDSDPL GLGLAVIERL NNLQKQVGTK LAYLHVTQPR FTLLAQTESV SEKEEAHFMQ
301: KWREAYEGTF MCSGAFTRDS GMEAVAEGHA DLVSYGRLFI SNPDLVLRLK LNAPLTKYNR NTFYTQDPVI GYTDYPFFNG TTETKLSN

Best Arabidopsis Sequence Match ( AT2G06050.3 )
(BLAST)

001: MTAAQGNSNE TLFSSYKMGR FDLSHRVVLA PMTRCRALNG VPNAALAEYY AQRTTPGGFL ISEGTMVSPG SAGFPHVPGI YSDEQVEAWK QVVEAVHAKG
101: GFIFCQLWHV GRASHAVYQP NGGSPISSTN KPISENRWRV LLPDGSHVKY PKPRALEASE IPRVVEDYCL SALNAIRAGF DGIEIHGAHG YLIDQFLKDG
201: INDRTDQYGG SIANRCRFLK QVVEGVVSAI GASKVGVRVS PAIDHLDATD SDPLSLGLAV VGMLNKLQGV NGSKLAYLHV TQPRYHAYGQ TESGRQGSDE
301: EEAKLMKSLR MAYNGTFMSS GGFNKELGMQ AVQQGDADLV SYGRLFIANP DLVSRFKIDG ELNKYNRKTF YTQDPVVGYT DYPFLAPFSR L

Arabidopsis Description

OPR312-oxophytodienoate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUP0]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.