CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES12060

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G06050.1	EES12060	AT1G13030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032049_P002	Maize	extracellular, mitochondrion	95.52	96.24
Os08t0459600-01	Rice	cytosol	85.57	87.31
TraesCS7D01G405500.1	Wheat	golgi	83.83	86.41
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	83.58	86.15
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	82.84	85.38
TraesCS5B01G487600.1	Wheat	mitochondrion	73.38	77.43
KRH02619	Soybean	nucleus	74.38	75.13
KRH19303	Soybean	nucleus	73.63	74.37
GSMUA_Achr7P02310_001	Banana	mitochondrion	62.94	73.76
VIT_11s0016g01230.t01	Wine grape	plastid	71.64	72.36
Solyc07g007870.2.1	Tomato	plastid	70.65	71.72
PGSC0003DMT400079356	Potato	plastid	69.9	70.25
AT2G06050.1	Thale cress	cytosol, plastid	68.16	70.08
KRH02618	Soybean	mitochondrion	65.92	69.55
CDY50415	Canola	peroxisome	67.16	69.41
CDX93099	Canola	peroxisome	67.16	69.41
HORVU7Hr1G095960.1	Barley	plastid	82.59	68.59
KRH19304	Soybean	mitochondrion, plastid	66.17	68.56
Bra013161.1-P	Field mustard	peroxisome	66.17	68.38
EER89417	Sorghum	peroxisome	51.24	55.38
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	50.0	54.32
KXG26381	Sorghum	plastid	46.27	54.23
EES15864	Sorghum	peroxisome	49.75	53.62
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	50.99	53.25
KXG26383	Sorghum	plastid	49.5	53.07
KXG21012	Sorghum	cytosol	48.26	53.01
KXG30433	Sorghum	mitochondrion, plastid	48.01	52.59
EER89419	Sorghum	mitochondrion, peroxisome, plastid	50.25	52.47
EER89418	Sorghum	cytosol	49.01	52.25
EER88073	Sorghum	cytosol	49.01	52.25
EES12232	Sorghum	mitochondrion	47.01	49.87
OQU79576	Sorghum	plastid	15.67	40.91

Protein Annotations

MapMan:11.7.1.6	Gene3D:3.20.20.70	EntrezGene:8080649	InterPro:Aldolase_TIM	UniProt:C5YM52	EnsemblPlants:EES13971
ProteinID:EES13971	ProteinID:EES13971.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006629	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009620	GO:GO:0009695	GO:GO:0009791	GO:GO:0009908
GO:GO:0009987	GO:GO:0010181	GO:GO:0010193	GO:GO:0016491	GO:GO:0016629	GO:GO:0031408
GO:GO:0048443	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893
PANTHER:PTHR22893:SF67	EnsemblPlantsGene:SORBI_3007G151100	SUPFAM:SSF51395	unigene:Sbi.4866	UniParc:UPI0001A87A59	RefSeq:XP_002444476.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:58295202..58299643

Molecular Weight (calculated)

44532.7 Da

IEP (calculated)

7.980

GRAVY (calculated)

-0.393

Length

402 amino acids

Sequence
(BLAST)

001: MASTDRSTPA EDQQQQQPQR PSLFSPYQMP RFRLAHRVVL APMTRCRAPD AIPGPALAEY YAQRSTEGGL LISEGTIISP SGPGFPRVPG IYNQEQTDAW
101: RKVVDAVHAK GAIFFCQLWH VGRASHQVYQ PGGAAPISST DKPISSRWRI LMPDGSYGKY PTPTRLATSE IPEIVEQYRQ AAINAIKAGF DGIEIHGAHG
201: YLIDQFLKDG INERTDEYGG SLSNRCRFLL EVTRAVVSAI GADRVAVRVS PAIDHLDAYD SNPLQLGLAV VDRLNALQQE VGRLLAYFHV TQPRYTAYGQ
301: TESGQHGSAE EESRLMRALR GAYRGTFMCS GGYTRELGVE AVESGDADLV SYGRLFIANP DLVERFRRDA PLNKYVRKTF YTPDPVVGYT DYPFLGQPKA
401: RM

Best Arabidopsis Sequence Match ( AT2G06050.3 )
(BLAST)

001: MTAAQGNSNE TLFSSYKMGR FDLSHRVVLA PMTRCRALNG VPNAALAEYY AQRTTPGGFL ISEGTMVSPG SAGFPHVPGI YSDEQVEAWK QVVEAVHAKG
101: GFIFCQLWHV GRASHAVYQP NGGSPISSTN KPISENRWRV LLPDGSHVKY PKPRALEASE IPRVVEDYCL SALNAIRAGF DGIEIHGAHG YLIDQFLKDG
201: INDRTDQYGG SIANRCRFLK QVVEGVVSAI GASKVGVRVS PAIDHLDATD SDPLSLGLAV VGMLNKLQGV NGSKLAYLHV TQPRYHAYGQ TESGRQGSDE
301: EEAKLMKSLR MAYNGTFMSS GGFNKELGMQ AVQQGDADLV SYGRLFIANP DLVSRFKIDG ELNKYNRKTF YTQDPVVGYT DYPFLAPFSR L

Arabidopsis Description

OPR312-oxophytodienoate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUP0]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.