Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025294_P002 | Maize | plasma membrane | 36.71 | 84.26 |
| Zm00001d003872_P002 | Maize | nucleus | 46.43 | 81.66 |
| Os12t0288801-00 | Rice | plastid | 9.71 | 67.33 |
| GSMUA_Achr9P17930_001 | Banana | cytosol | 7.71 | 60.0 |
| Os12t0288600-01 | Rice | nucleus | 45.57 | 56.86 |
| TraesCS1A01G328700.1 | Wheat | nucleus | 55.86 | 54.01 |
| TraesCS1D01G331000.1 | Wheat | nucleus | 55.0 | 53.4 |
| TraesCS1B01G342400.2 | Wheat | nucleus | 55.71 | 53.21 |
| GSMUA_Achr9P01970_001 | Banana | nucleus | 30.71 | 34.34 |
| Bra019804.1-P | Field mustard | nucleus | 27.43 | 31.48 |
| VIT_01s0137g00610.t01 | Wine grape | nucleus | 29.0 | 31.14 |
| CDX98018 | Canola | nucleus | 27.0 | 31.03 |
| KRH31353 | Soybean | nucleus | 28.0 | 30.77 |
| AT1G13030.1 | Thale cress | nucleus | 26.71 | 30.76 |
| Bra026939.1-P | Field mustard | nucleus | 26.14 | 30.7 |
| CDY16053 | Canola | nucleus | 26.0 | 30.28 |
| CDY26609 | Canola | nucleus | 25.86 | 30.22 |
| KRG97521 | Soybean | nucleus | 22.29 | 28.68 |
| CDY19377 | Canola | nucleus | 11.57 | 26.13 |
| GSMUA_Achr9P07590_001 | Banana | nucleus | 14.43 | 25.7 |
| Solyc05g013740.2.1 | Tomato | nucleus | 27.57 | 23.51 |
| Solyc02g067090.2.1 | Tomato | nucleus | 16.71 | 23.03 |
| PGSC0003DMT400064747 | Potato | nucleus | 16.29 | 22.44 |
| GSMUA_Achr9P17940_001 | Banana | nucleus | 6.57 | 16.73 |
Protein Annotations
| EnsemblPlants:EES12060 | EnsemblPlantsGene:SORBI_3006G059500 | InterPro:Coilin | InterPro:Coilin_N | PANTHER:PTHR15197 | PFAM:PF15862 |
| ProteinID:EES12060 | ProteinID:EES12060.2 | SEG:seg | unigene:Sbi.12510 | UniParc:UPI00081ABAAF | UniProt:C5YFA7 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:40860703..40873317
Molecular Weight (calculated)
78016.0 Da
IEP (calculated)
8.511
GRAVY (calculated)
-0.805
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPPPAEPA PVRLRLLFEN SRLLRRAQRD ERLRRCWLLL SPELTTVADL AAHVAARFRL RRTCPQGVVL SMDGFTLPPF ESTCIFRDND IIRVKQKSCT
101: KQVGHNDVHC IQGHEIIEKK PLPVDDRILA IQDQKDGCKH QEEEVHDHQL EENATASHSI ENNGTSSKRK WNDGIAEIPE SSKCRGKRLK VKKSGKQIDY
201: SEEEQSGSKK LKLSVIDIEA KEATPQYETT TTLVEQQKSE GNNQTELKCE AKVVDSNAQS DTTKLESRSA RRKKIKRLMR QTGKLPSEKN VHEDSPIVAD
301: FPSSSNQDGL PVPSSNQNGS HVHFSSLKAD EEESDTSEEI VPVVVRPGHI RFEPAGGEPN KSPAKELQGT FQWSATMSKK KGQKWGMNSS NKKSADIGYH
401: AGIAGSDTEV NNHVMDIKVT KNDFCAVSNR RNNEGSNIEM SSVKSVANEE KSSGEPFDFE SLYPLTRLPK EGDLIAYRLV ELSSMLCPEL SSYRVGKVLI
501: YDPVSSRIIL LPVQKYPITI EEKENKDESD MLADLSPYKE DGSLEIEYSS LLDVRLLKGA EPVLGAASTP SALAGRPVTL HKNKGNIVSQ KSLLVANSTK
601: DEERKLEGNI GRQKSPLVAN NTKDEERKLG KSESTVWEKN DEPSDKVDVQ ENGWGTWKQN ASTSAWSYRA LRSSALGPTM AMLRGKNSQR GKPPYRKNGK
101: KQVGHNDVHC IQGHEIIEKK PLPVDDRILA IQDQKDGCKH QEEEVHDHQL EENATASHSI ENNGTSSKRK WNDGIAEIPE SSKCRGKRLK VKKSGKQIDY
201: SEEEQSGSKK LKLSVIDIEA KEATPQYETT TTLVEQQKSE GNNQTELKCE AKVVDSNAQS DTTKLESRSA RRKKIKRLMR QTGKLPSEKN VHEDSPIVAD
301: FPSSSNQDGL PVPSSNQNGS HVHFSSLKAD EEESDTSEEI VPVVVRPGHI RFEPAGGEPN KSPAKELQGT FQWSATMSKK KGQKWGMNSS NKKSADIGYH
401: AGIAGSDTEV NNHVMDIKVT KNDFCAVSNR RNNEGSNIEM SSVKSVANEE KSSGEPFDFE SLYPLTRLPK EGDLIAYRLV ELSSMLCPEL SSYRVGKVLI
501: YDPVSSRIIL LPVQKYPITI EEKENKDESD MLADLSPYKE DGSLEIEYSS LLDVRLLKGA EPVLGAASTP SALAGRPVTL HKNKGNIVSQ KSLLVANSTK
601: DEERKLEGNI GRQKSPLVAN NTKDEERKLG KSESTVWEKN DEPSDKVDVQ ENGWGTWKQN ASTSAWSYRA LRSSALGPTM AMLRGKNSQR GKPPYRKNGK
001: MEEEKVRVRL VFEDRRILSK YQKKQGLTRS WVVLNRKCHR TISEFSDHIF HTFSLCEACP HGLSLSMEGF VLPPFESSCV LKDKDIVCVK KKKESLLEIV
101: GEDSDENVYN AIEVEERPQI RPGEMLLANE EFQKETGGYE SESEEDELEE EAEEFVPEKK ASKKRKTSSK NQSTKRKKCK LDTTEESPDE RENTAVVSNV
201: VKKKKKKKSL DVQSANNDEQ NNDSTKPMTK SKRSSQQEES KEHNDLCQLS AETKKTPSRS ARRKKAKRQW LREKTKLEKE ELLQTQLVVA PSQKPVITID
301: HQATKEKHCE TLENQQAEEV SDGFGDEVVP VEVRPGHIRF KPLAGTDEAS LDSEPLVENV LWNGNMTKKK GQKWGTEKSG FSKRYAQDFN EDATTQPAEA
401: ETLANCPIDY EQLVAYTGSV KKGDVIAYRL IELTSSWTPE VSSFRVGKIS YYDPDSKMVT LMPVQEFPIE KKTEEDDDFC MQPDTSLYKE DGSLEIEFSA
501: LLDVRSVKTS SSDSAEVAKS ALPEPDQSAK KPKLSANKEL QTPAKENGEV SPWEELSEAL SAKKAALSQA NNGWNKKGSS SGGSWSYKAL RGSAMGPVMN
601: YLRSQKEI
101: GEDSDENVYN AIEVEERPQI RPGEMLLANE EFQKETGGYE SESEEDELEE EAEEFVPEKK ASKKRKTSSK NQSTKRKKCK LDTTEESPDE RENTAVVSNV
201: VKKKKKKKSL DVQSANNDEQ NNDSTKPMTK SKRSSQQEES KEHNDLCQLS AETKKTPSRS ARRKKAKRQW LREKTKLEKE ELLQTQLVVA PSQKPVITID
301: HQATKEKHCE TLENQQAEEV SDGFGDEVVP VEVRPGHIRF KPLAGTDEAS LDSEPLVENV LWNGNMTKKK GQKWGTEKSG FSKRYAQDFN EDATTQPAEA
401: ETLANCPIDY EQLVAYTGSV KKGDVIAYRL IELTSSWTPE VSSFRVGKIS YYDPDSKMVT LMPVQEFPIE KKTEEDDDFC MQPDTSLYKE DGSLEIEFSA
501: LLDVRSVKTS SSDSAEVAKS ALPEPDQSAK KPKLSANKEL QTPAKENGEV SPWEELSEAL SAKKAALSQA NNGWNKKGSS SGGSWSYKAL RGSAMGPVMN
601: YLRSQKEI
Arabidopsis Description
COILCoilin [Source:UniProtKB/Swiss-Prot;Acc:Q8RWK8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.