Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P07590_001 | Banana | nucleus | 56.73 | 39.69 |
| GSMUA_Achr9P01970_001 | Banana | nucleus | 23.27 | 10.22 |
| Zm00001d025294_P002 | Maize | plasma membrane | 10.91 | 9.84 |
| PGSC0003DMT400064747 | Potato | nucleus | 15.27 | 8.27 |
| Os12t0288600-01 | Rice | nucleus | 16.73 | 8.2 |
| Zm00001d003872_P002 | Maize | nucleus | 11.27 | 7.79 |
| Solyc02g067090.2.1 | Tomato | nucleus | 14.18 | 7.68 |
| AT1G13030.1 | Thale cress | nucleus | 16.36 | 7.4 |
| Bra026939.1-P | Field mustard | nucleus | 16.0 | 7.38 |
| VIT_01s0137g00610.t01 | Wine grape | nucleus | 17.45 | 7.36 |
| KRH31353 | Soybean | nucleus | 16.73 | 7.22 |
| CDY26609 | Canola | nucleus | 15.64 | 7.18 |
| KRG97521 | Soybean | nucleus | 14.18 | 7.17 |
| CDY16053 | Canola | nucleus | 15.27 | 6.99 |
| GSMUA_Achr9P17930_001 | Banana | cytosol | 2.18 | 6.67 |
| EES12060 | Sorghum | nucleus | 16.73 | 6.57 |
| TraesCS1A01G328700.1 | Wheat | nucleus | 17.09 | 6.49 |
| TraesCS1B01G342400.2 | Wheat | nucleus | 17.09 | 6.41 |
| TraesCS1D01G331000.1 | Wheat | nucleus | 16.36 | 6.24 |
| Bra019804.1-P | Field mustard | nucleus | 13.45 | 6.07 |
| Os12t0288801-00 | Rice | plastid | 2.18 | 5.94 |
| CDY19377 | Canola | nucleus | 6.55 | 5.81 |
| Zm00001d003875_P001 | Maize | nucleus, plastid | 4.0 | 5.79 |
| CDX98018 | Canola | nucleus | 12.73 | 5.75 |
| Zm00001d025291_P001 | Maize | plastid | 5.09 | 5.58 |
| Solyc05g013740.2.1 | Tomato | nucleus | 16.36 | 5.48 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P17940_001 | EnsemblPlants:GSMUA_Achr9T17940_001 | EnsemblPlantsGene:GSMUA_Achr9G17940_001 | SEG:seg | UniParc:UPI00029690CB | UniProt:M0U1A1 |
| MapMan:35.2 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G17940_001]
Coordinates
chr9:+:12568435..12571100
Molecular Weight (calculated)
31000.4 Da
IEP (calculated)
9.945
GRAVY (calculated)
-0.894
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIDNNLLVH PDLPVNSWTN KRKKRRGSCD FQQNTTNIHA ILSEETNLKK KEHMNKTQML KRKKLNRSNT EKPIITAEPD ENVLFEKNEH FVQKRSSLRR
101: ILNRKDGTSD GDGRCDSLIS NRLHQAHSNY CRNQPESHAN CKAERSEYPL LVDVSFLKTI STSDMQGDGS KIAALVNNWE VAVSVASAKE SSTHVTEPMP
201: NSDWGQMQQG LGERMKTQLQ ENRWDCWIAN KISATPWPWA VSGRGAVGTA DGSFGGKWGN QAPAKYVTNL KSSKS
101: ILNRKDGTSD GDGRCDSLIS NRLHQAHSNY CRNQPESHAN CKAERSEYPL LVDVSFLKTI STSDMQGDGS KIAALVNNWE VAVSVASAKE SSTHVTEPMP
201: NSDWGQMQQG LGERMKTQLQ ENRWDCWIAN KISATPWPWA VSGRGAVGTA DGSFGGKWGN QAPAKYVTNL KSSKS
1: MAITKNMLVV LLLTIIFVTS SVHCSDSALG IGIKEDWEVC FSIDPCLTGE GTLGCTKWCR NHINLSLVGY CRTDPEHCCC VAEK
Arabidopsis Description
Defensin-like protein 116 [Source:UniProtKB/Swiss-Prot;Acc:Q3E8I8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.