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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P17930_001 Banana cytosol 9.11 63.33
Os12t0288801-00 Rice plastid 8.31 51.49
VIT_01s0137g00610.t01 Wine grape nucleus 36.9 35.43
Zm00001d025294_P002 Maize plasma membrane 17.09 35.08
CDX98018 Canola nucleus 34.03 34.98
Bra019804.1-P Field mustard nucleus 33.39 34.26
KRH31353 Soybean nucleus 34.66 34.07
Zm00001d003872_P002 Maize nucleus 21.09 33.17
AT1G13030.1 Thale cress nucleus 32.11 33.06
CDY26609 Canola nucleus 31.15 32.55
CDY16053 Canola nucleus 31.15 32.45
Bra026939.1-P Field mustard nucleus 30.83 32.38
KRG97521 Soybean nucleus 28.11 32.35
Zm00001d025291_P001 Maize plastid 12.78 31.87
GSMUA_Achr9P07590_001 Banana nucleus 19.81 31.55
EES12060 Sorghum nucleus 34.34 30.71
CDY19377 Canola nucleus 15.02 30.32
TraesCS1A01G328700.1 Wheat nucleus 34.82 30.11
TraesCS1D01G331000.1 Wheat nucleus 34.5 29.96
Os12t0288600-01 Rice nucleus 26.84 29.95
TraesCS1B01G342400.2 Wheat nucleus 34.66 29.6
Solyc02g067090.2.1 Tomato nucleus 22.04 27.17
PGSC0003DMT400064747 Potato nucleus 22.04 27.17
Zm00001d003875_P001 Maize nucleus, plastid 8.15 26.84
Solyc05g013740.2.1 Tomato nucleus 33.39 25.46
GSMUA_Achr9P17940_001 Banana nucleus 10.22 23.27
Protein Annotations
EnsemblPlants:GSMUA_Achr9P01970_001EnsemblPlants:GSMUA_Achr9T01970_001EnsemblPlantsGene:GSMUA_Achr9G01970_001InterPro:CoilinInterPro:Coilin_NPANTHER:PTHR15197
PFAM:PF15862SEG:segUniParc:UPI000296BC39UniProt:M0TWQ4MapMan:35.1:
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr9G01970_001]
Coordinates
chr9:+:1497654..1509328
Molecular Weight (calculated)
70734.1 Da
IEP (calculated)
6.766
GRAVY (calculated)
-0.830
Length
626 amino acids
Sequence
(BLAST)
001: MEDAVRLRVE FDDHRVLTKT QRLEGLCRCW LLLPPELSTV SDVATHLVRA FALHLSCPHG VLLSMDEFVL PPFESSSIFR DKDIVRVKKK VAKTKQLLEI
101: CGDAYHIQDS KIVEKQPITS GNELLNIKDF HEDLELCKSK KGEDACEVEG NTTKRQILSS EETILKRKRK QSDKPQNSKK KIKLTSPTSE ETIVTADQEE
201: NVHSDLQKSP TLDKTHILSN RNEKHEKLVS SQNAVQKRNC HVTTKERHDQ VENCHRIPSQ QQLTDSMNKS PSRSARRKKA KRQWLREMAN QQLSENKQGE
301: KQANDVQGTL SKYKIVDQTI EIEEEIVPVI VRPGHIRFEP IDGDGEHDNT QSNGPVETLQ WNGTTSKKKG QKWGREKTLS KKSDDDYCNG AFNENMITEE
401: GEHVDDHINF ESLFPLTRLP EEGDILVYRL VELSSSWCPE LSSFRVGKVS SYDSISMKIV LLPIPEYPIS SQEKKDAEES AQEPDSTLYK EDGSLEIEYT
501: SLVDVRLLKG HDSDNLHNEK SKEKAQSNNW DLALVDANPR HSAAPLVESR PTMGWDQIDQ ALSERKAQLQ QTDTWAIKGS TTASWSYRAL RGSALGPTLA
601: LLRGTNGSSN ANSPGKHASG KYPSSK
Best Arabidopsis Sequence Match ( AT1G13030.1 )
(BLAST)
001: MEEEKVRVRL VFEDRRILSK YQKKQGLTRS WVVLNRKCHR TISEFSDHIF HTFSLCEACP HGLSLSMEGF VLPPFESSCV LKDKDIVCVK KKKESLLEIV
101: GEDSDENVYN AIEVEERPQI RPGEMLLANE EFQKETGGYE SESEEDELEE EAEEFVPEKK ASKKRKTSSK NQSTKRKKCK LDTTEESPDE RENTAVVSNV
201: VKKKKKKKSL DVQSANNDEQ NNDSTKPMTK SKRSSQQEES KEHNDLCQLS AETKKTPSRS ARRKKAKRQW LREKTKLEKE ELLQTQLVVA PSQKPVITID
301: HQATKEKHCE TLENQQAEEV SDGFGDEVVP VEVRPGHIRF KPLAGTDEAS LDSEPLVENV LWNGNMTKKK GQKWGTEKSG FSKRYAQDFN EDATTQPAEA
401: ETLANCPIDY EQLVAYTGSV KKGDVIAYRL IELTSSWTPE VSSFRVGKIS YYDPDSKMVT LMPVQEFPIE KKTEEDDDFC MQPDTSLYKE DGSLEIEFSA
501: LLDVRSVKTS SSDSAEVAKS ALPEPDQSAK KPKLSANKEL QTPAKENGEV SPWEELSEAL SAKKAALSQA NNGWNKKGSS SGGSWSYKAL RGSAMGPVMN
601: YLRSQKEI
Arabidopsis Description
COILCoilin [Source:UniProtKB/Swiss-Prot;Acc:Q8RWK8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.