CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 2
plastid 1
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26381	Sorghum	plastid	76.22	82.22
TraesCS2A01G311200.3	Wheat	mitochondrion	78.92	79.78
TraesCS2D01G309400.1	Wheat	plastid	78.92	78.92
TraesCS6D01G302300.2	Wheat	plastid	78.11	78.11
GSMUA_Achr3P02810_001	Banana	plastid	63.78	77.89
TraesCS6B01G353200.2	Wheat	plastid	77.57	77.57
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	77.84	77.42
TraesCS2B01G328100.1	Wheat	plastid	75.68	76.09
Solyc11g032130.1.1	Tomato	mitochondrion	71.08	74.29
KXG26383	Sorghum	plastid	72.16	71.2
Bra008591.1-P	Field mustard	plastid	70.0	69.25
Bra008271.1-P	Field mustard	peroxisome	70.0	69.25
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	69.19	68.45
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	49.19	67.66
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	49.19	67.66
AT1G09400.1	Thale cress	mitochondrion	58.92	67.28
Bra031012.1-P	Field mustard	cytosol	67.3	67.12
Solyc10g086220.1.1	Tomato	extracellular	67.84	66.76
AT1G76680.2	Thale cress	peroxisome	70.27	65.49
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	67.3	64.68
KXG30433	Sorghum	mitochondrion, plastid	64.05	64.58
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	74.59	64.19
EER89419	Sorghum	mitochondrion, peroxisome, plastid	66.76	64.16
EER89417	Sorghum	peroxisome	64.32	63.98
Bra030773.1-P	Field mustard	plastid	64.59	63.73
VIT_18s0041g02090.t01	Wine grape	cytosol	14.05	63.41
EER88073	Sorghum	cytosol	63.51	62.33
Solyc11g032230.1.1	Tomato	cytosol	54.59	61.77
KXG21012	Sorghum	cytosol	60.81	61.48
EES15864	Sorghum	peroxisome	61.35	60.86
EER89418	Sorghum	cytosol	61.62	60.48
EES12232	Sorghum	mitochondrion	61.35	59.89
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	47.84	59.4
Bra030774.1-P	Field mustard	plastid	19.19	59.17
EES13971	Sorghum	peroxisome, plastid	54.32	50.0
OQU79576	Sorghum	plastid	20.54	49.35

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	UniProt:A0A1B6PL26	InterPro:Aldolase_TIM	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	EnsemblPlants:KXG26382	ProteinID:KXG26382	ProteinID:KXG26382.1	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	EnsemblPlantsGene:SORBI_3006G091700	SUPFAM:SSF51395	UniParc:UPI0003C668D3

Description

hypothetical protein

Coordinates

chr6:-:46186783..46189648

Molecular Weight (calculated)

40848.1 Da

IEP (calculated)

5.999

GRAVY (calculated)

-0.313

Length

370 amino acids

Sequence
(BLAST)

001: MTSNDDGANN NGPLLTPYKM GKFRLSHRVV LAPLTRQRSY GNVPQPHAIL YYQQRTTEGG LLISEATGVS DTAQGYKDTP GIWTKEQVEA WKPIVDGVHA
101: KGGTFFCQIW HVGRVSNSTF QPNGQAPISS TDKPVQSKHV DKFTPLPPRR LETDEIPFIV NDFRVAARNA IEAGFDGVEI HGAHGYLIDQ FLKDHVNDRT
201: DIYGASLENR CRFAVEIIQA VVDEIGADKV GIRLSPFANY SGAVDSNPEA LGLYMANALN NFGVLYCHVV VPRMVKNGEN FETPSHIGLM RSAFKGTIIV
301: AGGYSREDGD YAVSSGYADL VAYGRLFLSN PDLPRRFEID ATLNKYNSET FYTPDPVIGY TDYPFLPSDV

Best Arabidopsis Sequence Match ( AT1G76680.1 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.