Factsheet for AT1G09400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32175	Canola	plastid	60.19	76.77
Bra030773.1-P	Field mustard	plastid	83.02	71.73
CDY31095	Canola	plastid	83.02	71.73
Bra030774.1-P	Field mustard	plastid	25.0	67.5
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	54.01	65.06
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	54.01	65.06
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	35.8	64.8
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	73.15	63.37
VIT_18s0041g02050.t01	Wine grape	mitochondrion	67.28	62.64
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	72.22	61.74
KRH13220	Soybean	mitochondrion, peroxisome, plastid	68.21	61.22
CDY32174	Canola	cytosol, peroxisome, plastid	15.43	60.98
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	71.3	60.95
TraesCS2A01G311200.3	Wheat	mitochondrion	68.83	60.93
TraesCS2D01G309400.1	Wheat	plastid	69.14	60.54
KXG26381	Sorghum	plastid	63.89	60.35
VIT_18s0041g02070.t01	Wine grape	mitochondrion	69.14	60.22
GSMUA_Achr6P17440_001	Banana	cytosol	59.26	59.81
TraesCS6D01G302300.2	Wheat	plastid	68.21	59.73
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	68.52	59.68
VIT_18s0041g02010.t01	Wine grape	cytosol	67.9	59.3
AT1G76680.2	Thale cress	peroxisome	72.53	59.19
TraesCS6B01G353200.2	Wheat	plastid	67.59	59.19
VIT_18s0041g02020.t01	Wine grape	cytosol	69.14	59.1
TraesCS2B01G328100.1	Wheat	plastid	66.98	58.97
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	67.28	58.92
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	8.64	58.33
KRH20560	Soybean	mitochondrion	65.12	57.49
KXG26383	Sorghum	plastid	66.05	57.07
VIT_18s0041g02040.t01	Wine grape	cytosol	59.88	57.06
Zm00001d003584_P001	Maize	extracellular	68.83	57.03
VIT_18s0041g02270.t01	Wine grape	vacuole	29.32	56.89
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	67.59	50.93
AT2G06050.1	Thale cress	cytosol, plastid	51.85	42.97
OQU79576	Sorghum	plastid	19.14	40.26
Os01t0369900-01	Rice	cytosol	20.37	36.46

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EntrezGene:837462	ProteinID:AAC33200.1	ProteinID:AEE28437.1	EMBL:AK117769
ProteinID:ANM59780.1	ArrayExpress:AT1G09400	EnsemblPlantsGene:AT1G09400	RefSeq:AT1G09400	TAIR:AT1G09400	RefSeq:AT1G09400-TAIR-G
EnsemblPlants:AT1G09400.1	TAIR:AT1G09400.1	InterPro:Aldolase_TIM	Unigene:At.48172	EMBL:DQ652831	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785
RefSeq:NP_001322114.1	RefSeq:NP_172411.1	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PO:PO:0000293	PANTHER:PTHR22893
PANTHER:PTHR22893:SF88	UniProt:Q8GYA3	SUPFAM:SSF51395	UniParc:UPI000004820A	:	:

Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]

Coordinates

chr1:-:3033512..3035036

Molecular Weight (calculated)

36415.4 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.433

Length

324 amino acids

Sequence
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.