Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G311200.3 | Wheat | mitochondrion | 77.21 | 90.71 |
| TraesCS2D01G309400.1 | Wheat | plastid | 77.44 | 90.0 |
| TraesCS2B01G328100.1 | Wheat | plastid | 73.72 | 86.14 |
| HORVU6Hr1G078850.1 | Barley | cytosol, peroxisome | 8.84 | 79.17 |
| GSMUA_Achr3P02810_001 | Banana | plastid | 53.72 | 76.24 |
| KXG26382 | Sorghum | cytoskeleton, cytosol, peroxisome | 64.19 | 74.59 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 58.37 | 70.9 |
| AT1G09400.1 | Thale cress | mitochondrion | 50.93 | 67.59 |
| AT1G18020.1 | Thale cress | mitochondrion, peroxisome, plastid | 41.86 | 66.91 |
| AT1G17990.1 | Thale cress | mitochondrion, peroxisome, plastid | 41.86 | 66.91 |
| Bra008591.1-P | Field mustard | plastid | 58.14 | 66.84 |
| AT1G76690.1 | Thale cress | cytoskeleton, mitochondrion, peroxisome | 58.14 | 66.84 |
| Bra008271.1-P | Field mustard | peroxisome | 57.91 | 66.58 |
| Solyc10g086220.1.1 | Tomato | extracellular | 56.28 | 64.36 |
| Bra031012.1-P | Field mustard | cytosol | 54.42 | 63.07 |
| AT1G76680.2 | Thale cress | peroxisome | 57.67 | 62.47 |
| HORVU7Hr1G036060.3 | Barley | mitochondrion | 53.02 | 61.96 |
| HORVU7Hr1G036070.2 | Barley | cytosol, mitochondrion, peroxisome | 53.72 | 61.76 |
| Solyc11g032230.1.1 | Tomato | cytosol | 46.74 | 61.47 |
| Bra030773.1-P | Field mustard | plastid | 52.33 | 60.0 |
| HORVU1Hr1G001950.4 | Barley | mitochondrion, peroxisome | 52.56 | 59.63 |
| VIT_18s0041g02090.t01 | Wine grape | cytosol | 11.16 | 58.54 |
| HORVU1Hr1G001850.3 | Barley | mitochondrion, peroxisome | 51.4 | 58.16 |
| HORVU4Hr1G086050.2 | Barley | cytosol, peroxisome, plastid | 49.53 | 57.88 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.0 | 57.72 |
| Bra030774.1-P | Field mustard | plastid | 16.05 | 57.5 |
| KRH63555 | Soybean | mitochondrion | 10.23 | 57.14 |
| HORVU1Hr1G001960.1 | Barley | peroxisome | 53.02 | 57.14 |
| HORVU2Hr1G077210.1 | Barley | cytosol | 48.37 | 55.17 |
| HORVU7Hr1G118010.4 | Barley | mitochondrion | 38.6 | 47.03 |
| Os01t0369900-01 | Rice | cytosol | 18.14 | 43.09 |
| PGSC0003DMT400082779 | Potato | cytosol | 6.51 | 43.08 |
| HORVU7Hr1G095960.1 | Barley | plastid | 42.09 | 37.4 |
| HORVU2Hr1G004230.3 | Barley | peroxisome | 26.74 | 23.05 |
| CDY28613 | Canola | golgi, plastid, vacuole | 20.0 | 22.28 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G077220.22 | EnsemblPlantsGene:HORVU2Hr1G077220 | Gene3D:3.20.20.70 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:Aldolase_TIM | InterPro:IPR013785 | InterPro:OxRdtase_FMN_N | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | PFAM:PF00724 |
| SEG:seg | SUPFAM:SSF51395 | UniParc:UPI000B478C18 | UniProt:A0A287IIY2 | MapMan:50.1.3 | : |
Description
No Description!
Coordinates
chrchr2H:+:559103984..559112607
Molecular Weight (calculated)
48008.0 Da
IEP (calculated)
10.088
GRAVY (calculated)
-0.539
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: GPDSRVGEVF FPHSTEQYGR PPQLSFHQHK GWGVPRPTPT NGRRKRGRGA RTRSRPRKKM SNTALLTPYK MGRFDLSHRV VLAPLTRERS FGNVPQPHAV
101: LYYQQRTTEG GLLIAEATGV SDTAQGYKDT PGIWTKEQVE AWKPIVNGVH AKGGIFFCQI WHVGRVSNHT FQPNGQAPIS STDKPLKPVV RANGIDVATI
201: STPRRLQTNE IPLVINDFRV AARNAIEAGF DGVEIHGAHG YLIDQFLKDQ VNDRTDKYGG SLENRCRFAL EVVQAVVDEV GADKVGIRLS PFASYSEASD
301: SNPEALGLYM AHALNKFGIL YCHMVEPRMV NIGEKFETPH SLRPIRDAFK GTFIVAGGYD RDDGNKAIAD GYADLVAYGR LFLSNPDLPR RFEIGKEISL
401: RSDNQDFSYS PSKVKNARSQ LRYFKIRSNQ
101: LYYQQRTTEG GLLIAEATGV SDTAQGYKDT PGIWTKEQVE AWKPIVNGVH AKGGIFFCQI WHVGRVSNHT FQPNGQAPIS STDKPLKPVV RANGIDVATI
201: STPRRLQTNE IPLVINDFRV AARNAIEAGF DGVEIHGAHG YLIDQFLKDQ VNDRTDKYGG SLENRCRFAL EVVQAVVDEV GADKVGIRLS PFASYSEASD
301: SNPEALGLYM AHALNKFGIL YCHMVEPRMV NIGEKFETPH SLRPIRDAFK GTFIVAGGYD RDDGNKAIAD GYADLVAYGR LFLSNPDLPR RFEIGKEISL
401: RSDNQDFSYS PSKVKNARSQ LRYFKIRSNQ
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.