Factsheet for VIT_18s0041g02090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63555	Soybean	mitochondrion	52.44	55.84
PGSC0003DMT400082779	Potato	cytosol	26.83	33.85
VIT_18s0041g02270.t01	Wine grape	vacuole	58.54	28.74
Os01t0369900-01	Rice	cytosol	48.78	22.1
OQU79576	Sorghum	plastid	35.37	18.83
GSMUA_Achr3P02810_001	Banana	plastid	64.63	17.49
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	75.61	16.36
VIT_18s0041g02020.t01	Wine grape	cytosol	74.39	16.09
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	73.17	15.83
KXG26381	Sorghum	plastid	63.41	15.16
VIT_18s0041g02010.t01	Wine grape	cytosol	68.29	15.09
VIT_18s0041g02070.t01	Wine grape	mitochondrion	68.29	15.05
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	63.41	14.05
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	62.2	13.71
TraesCS2A01G311200.3	Wheat	mitochondrion	60.98	13.66
TraesCS6B01G353200.2	Wheat	plastid	60.98	13.51
TraesCS6D01G302300.2	Wheat	plastid	60.98	13.51
TraesCS2D01G309400.1	Wheat	plastid	60.98	13.51
Zm00001d003584_P001	Maize	extracellular	62.2	13.04
VIT_18s0041g02040.t01	Wine grape	cytosol	53.66	12.94
KXG26383	Sorghum	plastid	56.1	12.27
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	53.66	11.76
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	53.66	11.76
VIT_18s0041g02050.t01	Wine grape	mitochondrion	48.78	11.49
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	58.54	11.16
TraesCS2B01G328100.1	Wheat	plastid	50.0	11.14
CDY28613	Canola	golgi, plastid, vacuole	43.9	9.33
VIT_11s0016g01230.t01	Wine grape	plastid	45.12	9.3
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	0.0	0.0
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	0.0	0.0

Protein Annotations

EntrezGene:109121652	Gene3D:3.20.20.70	MapMan:50.1.3	InterPro:Aldolase_TIM	ProteinID:CCB61626	ProteinID:CCB61626.1
UniProt:F6I446	EMBL:FN596744	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893
PANTHER:PTHR22893:SF88	SUPFAM:SSF51395	UniParc:UPI000210A86A	ArrayExpress:VIT_18s0041g02090	EnsemblPlantsGene:VIT_18s0041g02090	EnsemblPlants:VIT_18s0041g02090.t01
RefSeq:XP_019071976.1	:	:	:	:	:

Description

No Description!

Coordinates

chr18:+:27216525..27217681

Molecular Weight (calculated)

8997.8 Da

IEP (calculated)

10.050

GRAVY (calculated)

-0.385

Length

82 amino acids

Sequence
(BLAST)

1: MDDKVQGQNG VSAETPIPLL RPYKLGKFQL SHRIVLAPLT RQRSWNNVPQ PPAILHYSQR TSKGGLLIAE ATGVSDTAEG YL

Best Arabidopsis Sequence Match ( AT1G76690.1 )
(BLAST)

001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA

Arabidopsis Description

OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.