Factsheet for VIT_18s0041g02050.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g02070.t01	Wine grape	mitochondrion	99.14	92.74
VIT_18s0041g02010.t01	Wine grape	cytosol	96.26	90.3
VIT_18s0041g02040.t01	Wine grape	cytosol	86.49	88.53
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	43.1	83.8
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	85.34	78.36
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	83.33	76.52
VIT_18s0041g02020.t01	Wine grape	cytosol	81.61	74.93
VIT_18s0041g02270.t01	Wine grape	vacuole	35.63	74.25
PGSC0003DMT400048327	Potato	cytosol	37.07	72.07
Solyc11g032130.1.1	Tomato	mitochondrion	72.13	70.9
PGSC0003DMT400048331	Potato	mitochondrion	70.69	70.49
Solyc10g086220.1.1	Tomato	extracellular	74.71	69.15
PGSC0003DMT400048344	Potato	cytosol	73.56	68.45
CDY45941	Canola	plastid	72.99	68.28
CDY20395	Canola	cytosol, mitochondrion, peroxisome	72.99	68.28
PGSC0003DMT400048328	Potato	cytosol	35.92	67.93
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	72.99	67.91
Bra008271.1-P	Field mustard	peroxisome	72.99	67.91
CDX69416	Canola	mitochondrion, plastid	72.7	67.65
CDY16975	Canola	mitochondrion, plastid	72.41	67.56
Bra008591.1-P	Field mustard	plastid	72.41	67.38
KRH13220	Soybean	mitochondrion, peroxisome, plastid	69.83	67.31
AT1G09400.1	Thale cress	mitochondrion	62.64	67.28
CDY32174	Canola	cytosol, peroxisome, plastid	15.8	67.07
PGSC0003DMT400048325	Potato	cytosol	25.0	66.92
Solyc11g032230.1.1	Tomato	cytosol	61.21	65.14
GSMUA_Achr6P17440_001	Banana	cytosol	60.06	65.11
AT1G76680.2	Thale cress	peroxisome	73.28	64.23
CDY21723	Canola	cytosol, mitochondrion, peroxisome	66.95	64.19
Bra031012.1-P	Field mustard	cytosol	66.95	62.8
Bra030773.1-P	Field mustard	plastid	67.53	62.67
CDY31095	Canola	plastid	67.53	62.67
CDX81857	Canola	cytosol	66.67	62.53
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.45	62.42
CDY32175	Canola	plastid	45.4	62.2
KRH20560	Soybean	mitochondrion	65.52	62.13
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	47.41	61.34
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	47.41	61.34
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	63.51	59.09
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	61.78	57.49
PGSC0003DMT400080542	Potato	extracellular	18.1	55.75
Bra030774.1-P	Field mustard	plastid	17.53	50.83
VIT_18s0041g02090.t01	Wine grape	cytosol	11.49	48.78
VIT_11s0016g01230.t01	Wine grape	plastid	54.31	47.49
PGSC0003DMT400072012	Potato	cytosol	18.39	43.54
CDY47292	Canola	mitochondrion, plastid	37.93	43.14

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EMBL:AM451693	InterPro:Aldolase_TIM	ProteinID:CAN74333	ProteinID:CAN74333.1
ProteinID:CCB61630	ProteinID:CCB61630.1	UniProt:F6I450	EMBL:FN596744	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395	UniParc:UPI000210A86B	ArrayExpress:VIT_18s0041g02050
EnsemblPlantsGene:VIT_18s0041g02050	EnsemblPlants:VIT_18s0041g02050.t01	:	:	:	:

Description

No Description!

Coordinates

chr18:-:27178512..27179917

Molecular Weight (calculated)

38556.6 Da

IEP (calculated)

5.409

GRAVY (calculated)

-0.284

Length

348 amino acids

Sequence
(BLAST)

001: MVVLAPLTRQ RSWDNVPQPH AILYYSQRAT KGGLLITEAT GVSDTAQGYA HTPGIWTKEQ VEAWKPIVDA VHAKGSIFIC QLWHVGRVSN TEFQPNGQAP
101: LSSTDKALTP QVRSNGFDVA EFTAPRRLTT DEVPRVVNDF RLAARNAMEA GFDGVEIHGA HGYLLDQFMK DQVNDRTDKY GGSLENRCRF PLEVVEAVVN
201: EIGADKVGIR LSPFGHHAEA GDSNPTALGL YMVESLNKYG VLYCHMVEPR IRAAGEMCEC PHSLVPLRKA FNGTFIAAGG YVKEDGNNAV AEERADLVAF
301: GRWFLANPDL PERFALNAPL NKYNRETFYA PEPIIGYTDY PFLEDIVE

Best Arabidopsis Sequence Match ( AT1G09400.2 )
(BLAST)

001: MPGIWRKEQI EAWKPIVDAV HSHGGIFFCQ LWHAGRVSHQ DCQPNGESPV SSTDKPFADD PSNEFTPPRR LRTDEIPTII NDFRLAARNA TEAGFDGVEI
101: HGAHGYLIDQ FMKDSVNDRT DSYGGSLENR CRFALQVIEA VSKEIGPDRV GIRLSPFADY MESGDTDPKR LGLYMAKSLN RFEILYCHMI EPRMKTVSEI
201: FECRESLTPM RNAFNGTFIV AGGYTREDGN KAVAEGRTDL VAYGRLFLAN PDLPKRFELN APLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.