CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 2
plastid 1
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031012.1-P	Field mustard	cytosol	96.97	94.88
CDX81857	Canola	cytosol	95.87	93.8
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	61.98	83.64
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	61.98	83.64
PGSC0003DMT400048327	Potato	cytosol	38.57	78.21
CDY32174	Canola	cytosol, peroxisome, plastid	17.36	76.83
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	36.64	74.3
Solyc11g032130.1.1	Tomato	mitochondrion	72.45	74.29
PGSC0003DMT400048325	Potato	cytosol	26.17	73.08
PGSC0003DMT400048328	Potato	cytosol	36.91	72.83
CDY20395	Canola	cytosol, mitochondrion, peroxisome	73.0	71.24
CDY45941	Canola	plastid	72.73	70.97
PGSC0003DMT400048344	Potato	cytosol	73.0	70.86
PGSC0003DMT400048331	Potato	mitochondrion	68.04	70.77
CDX69416	Canola	mitochondrion, plastid	72.73	70.59
CDY16975	Canola	mitochondrion, plastid	71.35	69.44
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	71.35	68.34
CDY31095	Canola	plastid	70.52	68.27
Solyc10g086220.1.1	Tomato	extracellular	70.52	68.09
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	71.07	68.07
CDY32175	Canola	plastid	47.11	67.32
VIT_18s0041g02070.t01	Wine grape	mitochondrion	68.87	67.2
VIT_18s0041g02050.t01	Wine grape	mitochondrion	64.19	66.95
VIT_18s0041g02020.t01	Wine grape	cytosol	69.7	66.75
VIT_18s0041g02010.t01	Wine grape	cytosol	68.04	66.58
GSMUA_Achr6P17440_001	Banana	cytosol	58.68	66.36
Solyc11g032230.1.1	Tomato	cytosol	58.95	65.44
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.52	62.75
PGSC0003DMT400080542	Potato	extracellular	19.01	61.06
VIT_18s0041g02040.t01	Wine grape	cytosol	56.47	60.29
VIT_18s0041g02270.t01	Wine grape	vacuole	27.27	59.28
CDY50415	Canola	peroxisome	52.89	49.36
CDX93099	Canola	peroxisome	52.62	49.1
PGSC0003DMT400072012	Potato	cytosol	19.56	48.3
CDY47292	Canola	mitochondrion, plastid	39.94	47.39
CDY28613	Canola	golgi, plastid, vacuole	24.52	23.06

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	GO:A0A078GAI3	UniProt:A0A078GAI3	InterPro:Aldolase_TIM	EnsemblPlants:CDY21723
ProteinID:CDY21723	ProteinID:CDY21723.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00016222001
InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395
UniParc:UPI0004EE231F	SEG:seg	:	:	:	:

Description

BnaA09g44740DBnaA09g44740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAI3]

Coordinates

chrLK032123:-:380655..382086

Molecular Weight (calculated)

40547.1 Da

IEP (calculated)

5.669

GRAVY (calculated)

-0.392

Length

363 amino acids

Sequence
(BLAST)

001: METKESIPLL TPYKMGPFNL SHRVVVAPMT RQRAYGYIAQ PHAKLYYTQR TTPGGFLISE SCAVSDTTKG YPDIPGIWTR EQVEAWKPIV DAVHAKGGIF
101: FCQIWHGGRP NGEAPVSSTD KPLTCNNIYG GQFTPPRRLR TEEIPAIVND FRVAARNAME AGFDGVEVHG AHGYLIDQFL KDKVNDRTDQ YGGSLENRCR
201: FAVEVIEAVV KEIGSDRVGI RLSPFADYME SGDSNPEALG LYMVQEMNKH GILYCHMVEP RMKLLEEMFE CTESLTPMRN AFKGTFIVAG GYSREDGNKV
301: VEAGGADLVG YGRTFLANPD LPRRFELDAP LNKYDRSTFY TSDPVVGYTD YPFLENRDTS ASC

Best Arabidopsis Sequence Match ( AT1G76690.1 )
(BLAST)

001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA

Arabidopsis Description

OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.