CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030774.1-P	Field mustard	plastid	31.47	98.33
CDY32174	Canola	cytosol, peroxisome, plastid	20.53	93.9
CDY32175	Canola	plastid	61.6	90.94
AT1G09400.1	Thale cress	mitochondrion	71.73	83.02
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	34.67	72.63
CDY45941	Canola	plastid	70.67	71.24
CDY20395	Canola	cytosol, mitochondrion, peroxisome	70.13	70.7
CDY21723	Canola	cytosol, mitochondrion, peroxisome	68.27	70.52
CDX69416	Canola	mitochondrion, plastid	70.13	70.32
CDY16975	Canola	mitochondrion, plastid	69.6	69.97
KRH13220	Soybean	mitochondrion, peroxisome, plastid	66.13	68.7
CDX81857	Canola	cytosol	66.93	67.66
VIT_18s0041g02050.t01	Wine grape	mitochondrion	62.67	67.53
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	67.73	67.02
VIT_18s0041g02010.t01	Wine grape	cytosol	66.13	66.85
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	67.47	66.75
VIT_18s0041g02070.t01	Wine grape	mitochondrion	66.13	66.67
GSMUA_Achr6P17440_001	Banana	cytosol	56.8	66.36
KRH20560	Soybean	mitochondrion	64.0	65.4
VIT_18s0041g02020.t01	Wine grape	cytosol	65.33	64.64
VIT_18s0041g02040.t01	Wine grape	cytosol	56.8	62.65
VIT_18s0041g02270.t01	Wine grape	vacuole	26.13	58.68
CDY50415	Canola	peroxisome	49.07	47.3
CDX93099	Canola	peroxisome	48.8	47.04
CDY47292	Canola	mitochondrion, plastid	37.07	45.42
CDY28613	Canola	golgi, plastid, vacuole	23.47	22.8

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	GO:A0A078GXC0	UniProt:A0A078GXC0	InterPro:Aldolase_TIM	EnsemblPlants:CDY31095
ProteinID:CDY31095	ProteinID:CDY31095.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00047176001
InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395
UniParc:UPI0004EE84A0	:	:	:	:	:

Description

BnaA08g26450DBnaA08g26450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXC0]

Coordinates

chrLK032267:+:217114..218869

Molecular Weight (calculated)

41950.5 Da

IEP (calculated)

5.857

GRAVY (calculated)

-0.455

Length

375 amino acids

Sequence
(BLAST)

001: MENGTSSATN QTIPLLTPFS MRNFNLSHRI VMPGMARMRS YGNVPQPHAA MYYSQRATPG GLLITEATGV SETAMAYHDM PGIWKKEQIE AWKPIIDAVH
101: SNGAVFFCQL WHAGRVSHRD SQPNGEAPIS STDKPLAETS SNEFTTSDEF TPPRRLRTDE IPNIVNDFRL AARNAIEAGF DGVEIHGAHG YLIDQFMKDT
201: VNDRTDFYGG SLENRCRFAL EVVEAVTNEI GSDRVGVRLS PFANYMQSGD TEPQKLGVYM AKSLNRFRTL YCHMVEPRMK TATEAFECTE SLTPMRKAFE
301: GAFIVAGGYT REDGNKAVAE GRTDLVAYGR LFLANPDLPR RFKLDAPLNK YDRTSFYTSD PVVGYTDYPF LETEP

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.