CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole

Predictor Summary:

plastid 3
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, vacuole
Any Predictor:	golgi, plastid, vacuole
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63555	Soybean	mitochondrion	9.33	46.75
VIT_18s0041g02090.t01	Wine grape	cytosol	9.33	43.9
PGSC0003DMT400082779	Potato	cytosol	6.48	38.46
CDY32175	Canola	plastid	19.95	30.32
GSMUA_Achr3P02810_001	Banana	plastid	23.06	29.37
OQU79576	Sorghum	plastid	11.66	29.22
CDX69416	Canola	mitochondrion, plastid	26.42	27.27
CDY20395	Canola	cytosol, mitochondrion, peroxisome	25.91	26.88
CDY45941	Canola	plastid	25.91	26.88
CDY16975	Canola	mitochondrion, plastid	25.91	26.81
Os01t0369900-01	Rice	cytosol	11.66	24.86
TraesCS6D01G302300.2	Wheat	plastid	23.58	24.59
CDY21723	Canola	cytosol, mitochondrion, peroxisome	23.06	24.52
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	23.58	24.46
TraesCS6B01G353200.2	Wheat	plastid	23.32	24.32
TraesCS2A01G311200.3	Wheat	mitochondrion	23.06	24.32
TraesCS2D01G309400.1	Wheat	plastid	23.06	24.05
CDX81857	Canola	cytosol	22.8	23.72
CDY31095	Canola	plastid	22.8	23.47
Zm00001d003584_P001	Maize	extracellular	23.58	23.27
TraesCS2B01G328100.1	Wheat	plastid	20.21	21.2
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	22.28	20.0
CDX93099	Canola	peroxisome	19.69	19.54
CDY50415	Canola	peroxisome	19.43	19.28
CDY47292	Canola	mitochondrion, plastid	13.21	16.67
CDY32174	Canola	cytosol, peroxisome, plastid	2.33	10.98
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	0.26	2.08

Protein Annotations

EnsemblPlants:CDY28613	EnsemblPlantsGene:GSBRNA2T00040643001	GO:A0A078GVE6	GO:GO:0003674	GO:GO:0003824	PANTHER:PTHR22893
PANTHER:PTHR22893:SF44	ProteinID:CDY28613	ProteinID:CDY28613.1	SUPFAM:SSF51395	UniParc:UPI0004EE2784	UniProt:A0A078GVE6
MapMan:35.1	:	:	:	:	:

Description

BnaA06g19250DBnaA06g19250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVE6]

Coordinates

chrLK032223:+:446641..451813

Molecular Weight (calculated)

43492.5 Da

IEP (calculated)

9.458

GRAVY (calculated)

-0.130

Length

386 amino acids

Sequence
(BLAST)

001: MCLCNTIGLK VVICFRPSEP LYYALTLICE LKACVFFVVL SSAATVMIKC PCCFYNGSRY GLYIFNPINS GVPYEFFNAL FPSARSVISG INRLVFLFWK
101: SRSLHVSATH LSYTYLSKQS IPLLTPYKMG RFNLSHRVFL APLTRQRATP GGLLITEATG VSDTDQGSRQ TPIPKIRTLA FRFIFSIIAI ENCEVLYTNR
201: ATGKEFSCPT KSGTSNLRKH KSGCRAYMVW KTANKSRDQS QINVDEEGNM SLSKVSEKVF REATNEMIVL GELPLSFVDD SLTAIRNGVQ YVRSSTNRLN
301: TSGRVLDPYR SCLTHFMVEV LQGVEIHGAN GYLIDQFHER HGERQNWRLR WIITKPTSVS GSHGGVSEQI RNLILSRDRS EDENNG

Best Arabidopsis Sequence Match ( AT1G76680.2 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGKHIL DLEFKKLKPF KILICVLVVA
201: GFDGVEIHGA NGYLIDQFMK DTVNDRTDEY GGSLQNRCKF PLEIVDAVAK EIGPDRVGIR LSPFADYMES GDTNPGALGL YMAESLNKYG ILYCHVIEAR
301: MKTMGEVHAC PHTLMPMRKA FKGTFISAGG FTREDGNEAV SKGRTDLVAY GRWFLANPDL PKRFQVDAPL NKYDRPTFYT SDPVVGYTDY PFLESTA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.