Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G353200.2 | Wheat | plastid | 81.72 | 82.16 |
| GSMUA_Achr3P02810_001 | Banana | plastid | 65.59 | 80.53 |
| TraesCS2B01G328100.1 | Wheat | plastid | 78.76 | 79.62 |
| KXG26382 | Sorghum | cytoskeleton, cytosol, peroxisome | 77.42 | 77.84 |
| Zm00001d003584_P001 | Maize | extracellular | 80.38 | 76.47 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 72.58 | 76.27 |
| AT1G76690.1 | Thale cress | cytoskeleton, mitochondrion, peroxisome | 70.97 | 70.59 |
| Bra008591.1-P | Field mustard | plastid | 70.7 | 70.32 |
| Bra008271.1-P | Field mustard | peroxisome | 70.43 | 70.05 |
| Solyc10g086220.1.1 | Tomato | extracellular | 69.62 | 68.88 |
| AT1G09400.1 | Thale cress | mitochondrion | 59.68 | 68.52 |
| Bra031012.1-P | Field mustard | cytosol | 67.74 | 67.92 |
| AT1G17990.1 | Thale cress | mitochondrion, peroxisome, plastid | 48.66 | 67.29 |
| AT1G18020.1 | Thale cress | mitochondrion, peroxisome, plastid | 48.66 | 67.29 |
| AT1G76680.2 | Thale cress | peroxisome | 71.77 | 67.25 |
| Solyc11g032230.1.1 | Tomato | cytosol | 57.8 | 65.75 |
| TraesCS7B01G079500.1 | Wheat | mitochondrion | 64.78 | 65.49 |
| TraesCS1B01G018700.1 | Wheat | peroxisome | 63.71 | 65.47 |
| Bra030773.1-P | Field mustard | plastid | 65.86 | 65.33 |
| TraesCS1B01G019700.1 | Wheat | mitochondrion | 63.44 | 65.19 |
| TraesCS2B01G040000.1 | Wheat | cytosol | 64.25 | 64.77 |
| TraesCS1B01G231000.2 | Wheat | peroxisome, plastid | 50.27 | 64.04 |
| TraesCS4B01G048500.1 | Wheat | mitochondrion | 62.1 | 63.81 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.08 | 63.76 |
| TraesCS1B01G019800.1 | Wheat | mitochondrion | 61.29 | 62.98 |
| VIT_18s0041g02090.t01 | Wine grape | cytosol | 13.71 | 62.2 |
| TraesCS1B01G018800.1 | Wheat | cytosol | 51.61 | 61.15 |
| KRH63555 | Soybean | mitochondrion | 12.63 | 61.04 |
| Bra030774.1-P | Field mustard | plastid | 19.62 | 60.83 |
| TraesCS2B01G328200.1 | Wheat | cytosol | 60.48 | 60.81 |
| TraesCS4B01G356100.1 | Wheat | cytosol | 62.37 | 59.34 |
| TraesCS7B01G079300.1 | Wheat | cytosol, peroxisome, plastid | 60.48 | 59.21 |
| TraesCS1B01G019600.1 | Wheat | mitochondrion | 52.42 | 58.73 |
| TraesCS7B01G079400.1 | Wheat | cytosol, vacuole | 44.62 | 58.25 |
| TraesCS7B01G455400.1 | Wheat | cytosol | 51.61 | 56.47 |
| TraesCS7B01G455300.1 | Wheat | mitochondrion | 49.19 | 53.35 |
| TraesCS7B01G311600.1 | Wheat | mitochondrion, peroxisome | 52.42 | 50.0 |
| TraesCS5B01G487600.1 | Wheat | mitochondrion | 51.08 | 49.87 |
| PGSC0003DMT400082779 | Potato | cytosol | 8.33 | 47.69 |
| Os01t0369900-01 | Rice | cytosol | 21.77 | 44.75 |
| CDY28613 | Canola | golgi, plastid, vacuole | 24.46 | 23.58 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G464800.1 | EnsemblPlantsGene:TraesCS6B01G464800 | Gene3D:3.20.20.70 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:Aldolase_TIM | InterPro:IPR013785 | InterPro:OxRdtase_FMN_N | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | PFAM:PF00724 |
| SUPFAM:SSF51395 | TIGR:cd02933 | MapMan:50.1.3 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:716009795..716015091
Molecular Weight (calculated)
40956.7 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.240
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKQGGIGST VPLLTPYKMG AFDLSHRVVL APLTRTRSYG NVPQPHAILY YQQRTTKGGL LIAEATGVSD TAQGYKDTPG IWTKEQVEAW KPIVDGVHAK
101: GGIFFCQIWH VGRVSNHTYQ PNGQAPISST DKPLKPMVID KHIVADFATP RPLETDEIPM VINDFRVAAR NAIEAGFDGV EIHGAHGYLI DQFFKDQVNG
201: RTDKYGGSLE NRCRFGLEVV QAVVDEIGAG KVGMRLSPFA NYWESSDSNP GALGLYMAHA LNKIGILYCH TVEPRMITFV DKVETPNSLR AMRDAFKGTF
301: IVAGGYGRED GNAAVSSGYA DLVAYGRLFL SNPDLPQRFE IDAPLNKYNR DTFYISDPVV GYTDYPFHLS DV
101: GGIFFCQIWH VGRVSNHTYQ PNGQAPISST DKPLKPMVID KHIVADFATP RPLETDEIPM VINDFRVAAR NAIEAGFDGV EIHGAHGYLI DQFFKDQVNG
201: RTDKYGGSLE NRCRFGLEVV QAVVDEIGAG KVGMRLSPFA NYWESSDSNP GALGLYMAHA LNKIGILYCH TVEPRMITFV DKVETPNSLR AMRDAFKGTF
301: IVAGGYGRED GNAAVSSGYA DLVAYGRLFL SNPDLPQRFE IDAPLNKYNR DTFYISDPVV GYTDYPFHLS DV
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.