Factsheet for TraesCS1B01G019800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G013700.1	Wheat	mitochondrion	95.86	95.86
TraesCS1B01G018700.1	Wheat	peroxisome	93.65	93.65
TraesCS1B01G019700.1	Wheat	mitochondrion	92.54	92.54
TraesCS1A01G015800.1	Wheat	cytoskeleton, cytosol, peroxisome	92.54	86.34
TraesCS4B01G048500.1	Wheat	mitochondrion	85.36	85.36
HORVU1Hr1G001960.1	Barley	peroxisome	92.54	83.96
TraesCS2B01G040000.1	Wheat	cytosol	79.28	77.78
GSMUA_Achr2P20800_001	Banana	mitochondrion	74.31	73.7
GSMUA_Achr2P20790_001	Banana	mitochondrion	61.33	73.51
TraesCS1B01G231000.2	Wheat	peroxisome, plastid	58.84	72.95
TraesCS7B01G079500.1	Wheat	mitochondrion	71.82	70.65
TraesCS1B01G018800.1	Wheat	cytosol	59.39	68.47
TraesCS1B01G019600.1	Wheat	mitochondrion	61.33	66.87
TraesCS6B01G353200.2	Wheat	plastid	64.92	63.51
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	66.3	63.16
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	49.45	62.81
TraesCS2B01G328100.1	Wheat	plastid	62.71	61.68
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	62.98	61.29
TraesCS4B01G356100.1	Wheat	cytosol	65.75	60.87
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	62.43	60.43
KRH51591	Soybean	cytosol	62.43	60.27
TraesCS7B01G455400.1	Wheat	cytosol	55.52	59.12
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	61.05	59.09
KRH05151	Soybean	nucleus	55.8	57.39
TraesCS7B01G455300.1	Wheat	mitochondrion	53.87	56.85
TraesCS2B01G328200.1	Wheat	cytosol	58.01	56.76
KRH17523	Soybean	cytosol	61.05	56.23
TraesCS5B01G487600.1	Wheat	mitochondrion	52.49	49.87
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	53.31	49.49
KRH06010	Soybean	mitochondrion	19.89	40.91

Protein Annotations

EnsemblPlants:TraesCS1B01G019800.1	EnsemblPlantsGene:TraesCS1B01G019800	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr1B:+:9269741..9271143

Molecular Weight (calculated)

40272.0 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.227

Length

362 amino acids

Sequence
(BLAST)

001: MEPIPLLTPY KMGQFDLAHR VVLAPLTRRR SYANVPQPHA AVYYSQRATA GGLLIAEATV ISDTGRGYTD TPGIWTAEHV EAWKPIIAAV HAKGALFFCQ
101: LWHVGRVSTF ELQPGGAAPL SSTEKGVGPQ MTFDGRLEEF SPPRRLTVQE IPAIVDDFRK AARNAIDAGF DGVEIHAANG YIIEQFLKDS ANDRTDEYGG
201: SLENRCQFAL EVVDAVVKEA GGHRVGIRLS PFADYMDCHD SDPHSLALYM STKLNDHDIL YIHMIEPRMA IVDGRRVVPK RLLPYRKAFK GTFIANGGYD
301: REEGGKVVVE GYTDLVAFGR LFLANPDLPK RFEVGADLNK YDRMTFYTPD PVIGYTDYPF LE

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.