Factsheet for VIT_18s0122g01170.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, peroxisome, mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
cytosol 1
mitochondrion 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	95.19	95.19
KRH51591	Soybean	cytosol	70.86	70.67
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	32.89	68.72
GSMUA_Achr6P07450_001	Banana	mitochondrion	51.34	67.61
KRH17523	Soybean	cytosol	70.05	66.67
TraesCS7D01G176000.1	Wheat	cytosol	41.18	66.38
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	66.84	65.96
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	66.58	65.7
HORVU7Hr1G036060.3	Barley	mitochondrion	63.9	64.95
VIT_18s0041g02010.t01	Wine grape	cytosol	64.17	64.69
Os06t0215600-02	Rice	plastid	64.44	64.44
TraesCS7B01G079500.1	Wheat	mitochondrion	63.37	64.4
VIT_18s0041g02070.t01	Wine grape	mitochondrion	63.9	64.25
TraesCS7A01G174700.1	Wheat	mitochondrion	63.37	64.23
VIT_18s0041g02020.t01	Wine grape	cytosol	64.97	64.12
KRH05151	Soybean	nucleus	60.16	63.92
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	65.51	63.64
VIT_18s0041g02050.t01	Wine grape	mitochondrion	59.09	63.51
TraesCS7D01G175800.1	Wheat	mitochondrion	50.53	63.21
Zm00001d044908_P001	Maize	mitochondrion, peroxisome, plastid	63.37	63.03
TraesCS1B01G018700.1	Wheat	peroxisome	60.96	62.98
TraesCS1B01G019700.1	Wheat	mitochondrion	60.96	62.98
TraesCS1A01G015700.1	Wheat	cytosol	60.96	62.98
TraesCS7A01G174500.1	Wheat	cytosol	56.15	62.87
EER89419	Sorghum	mitochondrion, peroxisome, plastid	64.71	62.86
HORVU7Hr1G036070.2	Barley	cytosol, mitochondrion, peroxisome	62.83	62.83
TraesCS2D01G028600.1	Wheat	peroxisome	55.35	62.73
TraesCS1D01G013600.1	Wheat	cytosol	60.7	62.71
TraesCS1D01G013500.1	Wheat	cytosol	60.7	62.71
Os06t0216200-00	Rice	plasma membrane	62.83	62.5
Zm00001d044906_P001	Maize	mitochondrion, peroxisome, plastid	62.3	62.47
TraesCS1B01G019800.1	Wheat	mitochondrion	60.43	62.43
TraesCS2A01G026600.1	Wheat	peroxisome	61.5	62.33
TraesCS4B01G048500.1	Wheat	mitochondrion	60.16	62.15
KXG30433	Sorghum	mitochondrion, plastid	60.96	62.13
Os06t0215900-02	Rice	cytosol	63.1	62.11
EER89417	Sorghum	peroxisome	61.76	62.1
EER88073	Sorghum	cytosol	62.57	62.07
TraesCS2B01G040000.1	Wheat	cytosol	61.23	62.06
TraesCS1B01G018800.1	Wheat	cytosol	51.87	61.78
TraesCS1D01G219500.1	Wheat	peroxisome	60.43	61.75
VIT_18s0041g02270.t01	Wine grape	vacuole	27.54	61.68
TraesCS1D01G013000.1	Wheat	mitochondrion	59.63	61.6
TraesCS1D01G013700.1	Wheat	mitochondrion	59.63	61.6
Zm00001d040842_P001	Maize	cytoskeleton, cytosol, peroxisome	61.23	61.56
TraesCS1A01G217700.1	Wheat	peroxisome	59.36	61.5
KXG21012	Sorghum	cytosol	60.16	61.48
TraesCS4D01G349500.1	Wheat	cytosol	59.89	61.2
TraesCS7D01G175700.2	Wheat	mitochondrion	22.99	60.99
Os06t0215500-01	Rice	cytosol, nucleus, peroxisome	63.37	60.61
TraesCS5A01G525300.1	Wheat	mitochondrion	58.56	60.0
HORVU1Hr1G001950.4	Barley	mitochondrion, peroxisome	60.7	59.89
TraesCS1A01G015500.1	Wheat	cytosol	60.7	59.89
VIT_18s0041g02040.t01	Wine grape	cytosol	54.28	59.71
HORVU4Hr1G086050.2	Barley	cytosol, peroxisome, plastid	58.56	59.51
HORVU1Hr1G001850.3	Barley	mitochondrion, peroxisome	60.43	59.47
Zm00001d037182_P001	Maize	extracellular	59.89	59.42
EES15864	Sorghum	peroxisome	59.09	59.25
TraesCS1D01G013400.1	Wheat	cytosol	60.43	59.16
Zm00001d011097_P001	Maize	cytosol	60.43	59.01
TraesCS1B01G019600.1	Wheat	mitochondrion	52.14	58.73
Os06t0216000-01	Rice	plastid	19.79	58.73
TraesCS7D01G175900.2	Wheat	cytosol	63.64	58.33
EER89418	Sorghum	cytosol	58.56	58.09
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	44.12	57.89
TraesCS1B01G231000.2	Wheat	peroxisome, plastid	45.19	57.88
Os02t0559400-01	Rice	cytosol, peroxisome	62.57	57.64
TraesCS1A01G015800.1	Wheat	cytoskeleton, cytosol, peroxisome	59.36	57.22
TraesCS1A01G015600.1	Wheat	vacuole	60.7	57.18
TraesCS4B01G356100.1	Wheat	cytosol	59.63	57.03
TraesCS2D01G309500.1	Wheat	golgi	56.15	56.76
EES12232	Sorghum	mitochondrion	57.49	56.73
HORVU1Hr1G001960.1	Barley	peroxisome	60.43	56.64
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	57.49	56.58
TraesCS2B01G328200.1	Wheat	cytosol	55.88	56.49
HORVU2Hr1G077210.1	Barley	cytosol	56.42	55.97
TraesCS7D01G175600.1	Wheat	mitochondrion	41.18	55.8
Os06t0216300-01	Rice	plastid	22.19	54.61
VIT_18s0041g02090.t01	Wine grape	cytosol	11.76	53.66
TraesCS7B01G455400.1	Wheat	cytosol	48.4	53.24
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	48.66	53.06
TraesCS7D01G524600.1	Wheat	peroxisome	48.4	52.92
Os04t0443750-00	Rice	cytoskeleton, cytosol, peroxisome	26.74	52.91
TraesCS7A01G537100.1	Wheat	mitochondrion	47.86	52.34
TraesCS7B01G455300.1	Wheat	mitochondrion	47.33	51.6
HORVU7Hr1G118010.4	Barley	mitochondrion	47.59	50.42
VIT_11s0016g01230.t01	Wine grape	plastid	52.67	49.5
KRH06010	Soybean	mitochondrion	19.79	42.05
Os01t0370000-01	Rice	mitochondrion	41.18	37.38
HORVU2Hr1G004230.3	Barley	peroxisome	33.69	25.25

Protein Annotations

EntrezGene:100256548	wikigene:100256548	Gene3D:3.20.20.70	MapMan:50.1.3	EMBL:AM425157	InterPro:Aldolase_TIM
ProteinID:CAN75591	ProteinID:CAN75591.1	ProteinID:CCB62655	ProteinID:CCB62655.1	UniProt:F6I6T7	EMBL:FN596759
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:IPR013785	EntrezGene:LOC100256548	wikigene:LOC100256548	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893
PANTHER:PTHR22893:SF62	SUPFAM:SSF51395	TIGR:TC67104	UniParc:UPI0001985162	ArrayExpress:VIT_18s0122g01170	EnsemblPlantsGene:VIT_18s0122g01170
EnsemblPlants:VIT_18s0122g01170.t01	unigene:Vvi.2408	RefSeq:XP_002272489	RefSeq:XP_002272489.1	:	:

Description

No Description!

Coordinates

chr18:+:794920..806040

Molecular Weight (calculated)

41887.4 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.485

Length

374 amino acids

Sequence
(BLAST)

001: MEAEGQRKKE AIPLLTPYRM GKFHLSHRMV LAPMSRLRSY NFTAQPHAVL YYSQRTTRGG FLIGEASGIS DTAQGYPNTP GIWRKEHVEA WKPVVDAVHE
101: KGGIFFCQLW HAGRASKYEY QPNGHPPISC TDKPITSEAQ IDGTTAADYS PPRRLSVQEI FQVVDDFRVA ARNAREAGFD GVEIHAANGY LVDQFLKDGV
201: NDRRDEYGGS LENRCRFPLQ VVEAIADEIG ADRVGVRLSP FADYNDCGDS NPPALGIYMA QELSKRGILY CHMIEPRMIT QFERVETKSS HGPMREAFKG
301: TFIAAGGYNR EDGNEAIANG NADLIAFGRL FLANPDLPKR FELDIPLNRY DRSTFYTSDP IVGYTGYPFL DQTP

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.