Factsheet for TraesCS1A01G015500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G018800.1	Wheat	cytosol	76.78	92.68
TraesCS1D01G013400.1	Wheat	cytosol	93.14	92.41
TraesCS1B01G019600.1	Wheat	mitochondrion	78.1	89.16
TraesCS2A01G026600.1	Wheat	peroxisome	72.3	74.25
TraesCS1A01G015700.1	Wheat	cytosol	70.71	74.03
TraesCS1A01G217700.1	Wheat	peroxisome	67.55	70.91
GSMUA_Achr2P20800_001	Banana	mitochondrion	67.02	69.59
GSMUA_Achr2P20790_001	Banana	mitochondrion	55.41	69.54
TraesCS1A01G015600.1	Wheat	vacuole	70.71	67.51
TraesCS7A01G174700.1	Wheat	mitochondrion	65.44	67.21
TraesCS1A01G015800.1	Wheat	cytoskeleton, cytosol, peroxisome	66.49	64.95
TraesCS7A01G174500.1	Wheat	cytosol	55.94	63.47
TraesCS2A01G311200.3	Wheat	mitochondrion	59.89	62.02
TraesCS5A01G525300.1	Wheat	mitochondrion	59.63	61.92
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	59.89	60.7
TraesCS7A01G537100.1	Wheat	mitochondrion	54.62	60.53
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	58.58	59.36
KRH51591	Soybean	cytosol	58.31	58.93
KRH05151	Soybean	nucleus	51.45	55.4
KRH17523	Soybean	cytosol	57.26	55.22
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	50.92	49.49
KRH06010	Soybean	mitochondrion	19.53	42.05

Protein Annotations

EnsemblPlants:TraesCS1A01G015500.1	EnsemblPlantsGene:TraesCS1A01G015500	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr1A:-:8291506..8292808

Molecular Weight (calculated)

41006.6 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.281

Length

379 amino acids

Sequence
(BLAST)

001: MAGEEGETGA AAIPLLAPYR AGSGELELAH RVVLAPLTRQ RSPGNLPQPH AAVYYAQRAT AGGMLITEAT GVSAAAQGHR PTPGVWTDEQ VDAWRPVVDA
101: VHAKGAVIFC QLWHVGRVVG KLRPDGTPAG TPRPVSSTGR PIATPRMNDG VEEEFATPRR LDVAEIAGVV DDFRRAARNA VDAGFDGVEI HGAHGYLVEQ
201: FLKDSANDRD DEYGGSLENR CRFALEVVTA VAREIGGRRV GVRLSPFADY MDCHDSDPHA LALHMATKLN GIPGGILYLH MVEPRMARAD GRRVVPKRLR
301: PYREAFGGTF IAAGGYDREE GNKVVGEGYA DLVAFGRLFL ANPDLPKRFE FDAKLNGYNR ATFYTSDPVV GYTDYPFLG

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.