Factsheet for TraesCS1A01G015800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

peroxisome 1
plastid 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	plastid
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G013700.1	Wheat	mitochondrion	86.6	92.82
TraesCS1B01G019800.1	Wheat	mitochondrion	86.34	92.54
TraesCS1A01G015700.1	Wheat	cytosol	83.76	89.78
HORVU1Hr1G001960.1	Barley	peroxisome	87.89	85.46
TraesCS1A01G015600.1	Wheat	vacuole	86.6	84.63
TraesCS2A01G026600.1	Wheat	peroxisome	71.91	75.61
TraesCS1A01G217700.1	Wheat	peroxisome	70.1	75.35
GSMUA_Achr2P20800_001	Banana	mitochondrion	66.49	70.68
GSMUA_Achr2P20790_001	Banana	mitochondrion	54.9	70.53
TraesCS7A01G174700.1	Wheat	mitochondrion	64.69	68.02
TraesCS1A01G015500.1	Wheat	cytosol	64.95	66.49
TraesCS7A01G174500.1	Wheat	cytosol	56.19	65.27
TraesCS2A01G311200.3	Wheat	mitochondrion	59.54	63.11
TraesCS5A01G525300.1	Wheat	mitochondrion	58.76	62.47
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	57.22	59.36
KRH51591	Soybean	cytosol	56.44	58.4
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	55.41	57.49
TraesCS7A01G537100.1	Wheat	mitochondrion	49.23	55.85
KRH05151	Soybean	nucleus	50.0	55.11
KRH17523	Soybean	cytosol	55.67	54.96
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	48.45	48.21
KRH06010	Soybean	mitochondrion	18.3	40.34

Protein Annotations

EnsemblPlants:TraesCS1A01G015800.1	EnsemblPlantsGene:TraesCS1A01G015800	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr1A:+:8320695..8322403

Molecular Weight (calculated)

43100.2 Da

IEP (calculated)

5.987

GRAVY (calculated)

-0.231

Length

388 amino acids

Sequence
(BLAST)

001: MDVLSTHHSL PHTTHESSSS SAIDQEKLQL SAMEPIPLLT PYKMGQFDLA HRVVLALLTR QRSYTPAVYY SQRATAGGLL IAEATVVSDT GRGYTHTPGI
101: WTAEHVEAWK PIVTAVHAKG ALFFCQIWHV GRVSTFELQP GGAAPLSSTE KGVGPQMTFD GRLEEFSPPR RLTVEEIPAI VDDFRKAARN AIDAGFDGVE
201: IHSANGYIIE QFLKDSANDR TDEYGGSLEN RCRFALEVVD AIVKEVGGHR VGIRLSPFAD YMDCHDSDPH SLALYMSTKL NDHDILYIHM IEPRMAVVDG
301: RRVVSKRLLP YREAFKGTFI ANGGYDREEG GKVIVEGYTD LVAFGRLFLA NPDLPKRFEI GADLNKYDRM TFYSPDPVIG YTGYPCLE

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.