Factsheet for TraesCS1A01G015600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G013500.1	Wheat	cytosol	88.41	96.96
TraesCS1B01G018700.1	Wheat	peroxisome	87.41	95.86
TraesCS1A01G015700.1	Wheat	cytosol	87.15	95.58
TraesCS1B01G019700.1	Wheat	mitochondrion	86.9	95.3
HORVU1Hr1G001960.1	Barley	peroxisome	92.7	92.23
TraesCS1A01G015800.1	Wheat	cytoskeleton, cytosol, peroxisome	84.63	86.6
TraesCS1A01G217700.1	Wheat	peroxisome	72.54	79.78
TraesCS2A01G026600.1	Wheat	peroxisome	74.06	79.67
GSMUA_Achr2P20800_001	Banana	mitochondrion	69.52	75.62
GSMUA_Achr2P20790_001	Banana	mitochondrion	57.43	75.5
TraesCS7A01G174700.1	Wheat	mitochondrion	66.25	71.27
TraesCS1A01G015500.1	Wheat	cytosol	67.51	70.71
TraesCS7A01G174500.1	Wheat	cytosol	58.19	69.16
TraesCS2A01G311200.3	Wheat	mitochondrion	60.96	66.12
TraesCS5A01G525300.1	Wheat	mitochondrion	59.45	64.66
KRH51591	Soybean	cytosol	58.19	61.6
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	57.18	60.7
TraesCS7A01G537100.1	Wheat	mitochondrion	51.39	59.65
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	55.92	59.36
KRH05151	Soybean	nucleus	51.89	58.52
KRH17523	Soybean	cytosol	57.18	57.76
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	48.61	49.49
KRH06010	Soybean	mitochondrion	18.14	40.91

Protein Annotations

EnsemblPlants:TraesCS1A01G015600.1	EnsemblPlantsGene:TraesCS1A01G015600	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr1A:+:8295508..8297188

Molecular Weight (calculated)

44052.4 Da

IEP (calculated)

5.589

GRAVY (calculated)

-0.230

Length

397 amino acids

Sequence
(BLAST)

001: MSCQLHYSPL TTTPLSSLLL PPLPLIDQEK LQLSAMEPIP LLTPYKMGQF DLAHRVVLAP LTRQRSYGNV PQPHAAVYYS QRATAGGLLI AEATGVSDTA
101: QGYTDTPGIW TTEHIEAWKP IVAAVHAKGA LFFCQIWHVG RVSTFELQPG GAAPLSSTEK GVGPQISFDG HREEFSPPRR LTVEEIPAIV DDFRKAARNA
201: IDAGFDGVEI HGANGYIIEQ FLKDSANDRA DEYGGTLENR CRFALEVVDA VVKEVGGRRV GIRLSPFTDY MDCHDSDPHS LALYMSTKLN DHDILYIHMI
301: EPRMAIVDGR RVVPKRLLPY REAFKGTFIA NGGYDREEGG KVVTEGYTDL VAFGRLFLAN PDLPKRFEVG AELNKYDRTT FYTSDPVVGY TDYPFLE

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.