Factsheet for HORVU1Hr1G001960.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 4
plastid 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G018700.1	Wheat	peroxisome	87.72	96.69
TraesCS1B01G019700.1	Wheat	mitochondrion	87.47	96.41
TraesCS1D01G013500.1	Wheat	cytosol	87.22	96.13
TraesCS1D01G013700.1	Wheat	mitochondrion	84.96	93.65
TraesCS1A01G015600.1	Wheat	vacuole	92.23	92.7
TraesCS1B01G019800.1	Wheat	mitochondrion	83.96	92.54
HORVU1Hr1G001950.4	Barley	mitochondrion, peroxisome	86.22	90.77
TraesCS1A01G015800.1	Wheat	cytoskeleton, cytosol, peroxisome	85.46	87.89
HORVU1Hr1G001850.3	Barley	mitochondrion, peroxisome	80.7	84.74
GSMUA_Achr2P20790_001	Banana	mitochondrion	57.14	75.5
GSMUA_Achr2P20800_001	Banana	mitochondrion	68.92	75.34
HORVU7Hr1G036070.2	Barley	cytosol, mitochondrion, peroxisome	65.66	70.05
HORVU7Hr1G036060.3	Barley	mitochondrion	62.66	67.93
HORVU4Hr1G086050.2	Barley	cytosol, peroxisome, plastid	59.9	64.95
KRH51591	Soybean	cytosol	58.15	61.87
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	56.64	60.43
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	55.39	59.09
HORVU2Hr1G077210.1	Barley	cytosol	55.64	58.89
KRH05151	Soybean	nucleus	51.13	57.95
KRH17523	Soybean	cytosol	56.64	57.51
HORVU7Hr1G118010.4	Barley	mitochondrion	49.12	55.52
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	57.14	53.02
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	5.76	47.92
KRH06010	Soybean	mitochondrion	18.05	40.91
HORVU7Hr1G095960.1	Barley	plastid	48.87	40.29
HORVU2Hr1G004230.3	Barley	peroxisome	40.1	32.06

Protein Annotations

EnsemblPlants:HORVU1Hr1G001960.1	EnsemblPlantsGene:HORVU1Hr1G001960	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	UniParc:UPI0002956379	UniProt:M0W7Y4	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chrchr1H:+:4189224..4190808

Molecular Weight (calculated)

44311.9 Da

IEP (calculated)

6.462

GRAVY (calculated)

-0.257

Length

399 amino acids

Sequence
(BLAST)

001: MDVPSTPLPT SHYPTPHISV LLPHPPLIDQ EKLQLSAMEP IPLLTPYKMG QFDLAHRVVL APLTRQRSYG NVPQPHAAVY YSQRATAGGL LIAEATGVSD
101: TAQGYTHTPG IWTAEHVEAW KPIVAAVHAK GALFFCQIWH VGRVSTFELQ PGGAAPLSST EKGVGPQMSF DGHREEFSPP RRLTIEEIPA IIDDFRKAAR
201: NAIDAGFDGV EIHGANGYII EQFLKDSAND RTDEYGGSLK NRCRFALEVV HAVVKEVGGH RVGIRLSPFT DYMDCHDSDP HSLALYMSTK LNEHGILYIH
301: MIEPRMAIVD GRRVVPKRLL PYREAFKGTF IANGGYDREE GGKVVTEGYT DLVAFGRLFL ANPDLPKRFE VGAELNKYDR MTFYTPDPVV GYTDYPFLE

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.