Factsheet for HORVU4Hr1G086050.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G349500.1	Wheat	cytosol	90.76	91.26
TraesCS5A01G525300.1	Wheat	mitochondrion	90.49	91.23
TraesCS4B01G356100.1	Wheat	cytosol	91.3	85.93
Zm00001d040842_P001	Maize	cytoskeleton, cytosol, peroxisome	75.54	74.73
EES15864	Sorghum	peroxisome	74.46	73.46
GSMUA_Achr2P20790_001	Banana	mitochondrion	57.34	69.87
GSMUA_Achr2P20800_001	Banana	mitochondrion	68.21	68.77
HORVU7Hr1G036070.2	Barley	cytosol, mitochondrion, peroxisome	64.4	63.37
HORVU7Hr1G036060.3	Barley	mitochondrion	62.5	62.5
HORVU1Hr1G001950.4	Barley	mitochondrion, peroxisome	63.86	62.01
HORVU1Hr1G001850.3	Barley	mitochondrion, peroxisome	63.32	61.32
HORVU1Hr1G001960.1	Barley	peroxisome	64.95	59.9
KRH51591	Soybean	cytosol	60.05	58.93
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	59.51	58.56
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.88	56.95
HORVU2Hr1G077210.1	Barley	cytosol	58.15	56.76
KRH05151	Soybean	nucleus	52.99	55.4
HORVU7Hr1G118010.4	Barley	mitochondrion	51.9	54.11
KRH17523	Soybean	cytosol	57.61	53.94
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	57.88	49.53
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	5.98	45.83
HORVU7Hr1G095960.1	Barley	plastid	54.62	41.53
KRH06010	Soybean	mitochondrion	19.29	40.34
HORVU2Hr1G004230.3	Barley	peroxisome	35.05	25.85

Protein Annotations

EnsemblPlants:HORVU4Hr1G086050.2	EnsemblPlantsGene:HORVU4Hr1G086050	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	UniParc:UPI000294AE22	UniProt:M0XNF1	MapMan:50.1.3	:

Description

No Description!

Coordinates

chrchr4H:-:633262717..633264570

Molecular Weight (calculated)

40573.0 Da

IEP (calculated)

6.232

GRAVY (calculated)

-0.204

Length

368 amino acids

Sequence
(BLAST)

001: METTTPTTTP LLTPYKMGDF NLAHRVVHAP LTRCRSYGNL AQPHNALYYA QRAAPGALLV AEACAVSEAA RGYPHVPGLW SQEQVAAWKP VVDAVHAKGA
101: VFFCQIWHTG RVSPVEFQPN GQAPVSSTDK QVTPQVAHDG SVFEFAAPRR LETAEIPHIV DDFRVAARNA IRAGFDGVEI HAANGYLIDQ FMKDGVNDRA
201: DAYGGGLENR CRFAAEVIAA VCHEAGAGRV GVRLSPFADY VDCVDSDPEA LALHVIGAMN GLGVLYCHMI EPRMCVNERM IPRRLLPFRK AFKGTFMVNG
301: GYDREEGDRA VDEGYANLVA YGRIFLANPD LPERFRRNAA LNKYDRSTFY TFDPVVGYTD YPFLDQDD

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.