Factsheet for Zm00001d040842_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15864	Sorghum	peroxisome	89.52	89.28
TraesCS4D01G349500.1	Wheat	cytosol	74.73	75.96
HORVU4Hr1G086050.2	Barley	cytosol, peroxisome, plastid	74.73	75.54
TraesCS5A01G525300.1	Wheat	mitochondrion	73.39	74.79
TraesCS4B01G356100.1	Wheat	cytosol	75.54	71.87
GSMUA_Achr2P20790_001	Banana	mitochondrion	56.99	70.2
GSMUA_Achr2P20800_001	Banana	mitochondrion	66.4	67.67
Zm00001d044906_P001	Maize	mitochondrion, peroxisome, plastid	64.25	64.08
Zm00001d011097_P001	Maize	cytosol	65.59	63.71
Zm00001d044908_P001	Maize	mitochondrion, peroxisome, plastid	64.25	63.56
Zm00001d003584_P001	Maize	extracellular	64.78	61.64
Zm00001d037182_P001	Maize	extracellular	62.37	61.54
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	61.56	61.23
KRH51591	Soybean	cytosol	60.48	60.0
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.22	59.89
KRH05151	Soybean	nucleus	54.3	57.39
KRH17523	Soybean	cytosol	58.6	55.47
Zm00001d032049_P002	Maize	extracellular, mitochondrion	54.03	50.38
Zm00001d050107_P001	Maize	extracellular, mitochondrion	53.76	50.13
KRH06010	Soybean	mitochondrion	18.82	39.77

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EntrezGene:732733	EMBL:AY921643	InterPro:Aldolase_TIM	EMBL:BT035132
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	ProteinID:ONM32139.1	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF44	UniProt:Q49HD9	SUPFAM:SSF51395	UniParc:UPI000057C56A
EnsemblPlantsGene:Zm00001d040842	EnsemblPlants:Zm00001d040842_P001	EnsemblPlants:Zm00001d040842_T001	:	:	:

Description

12-oxo-phytodienoic acid reductase6 12-oxo-phytodienoic acid reductase6

Coordinates

chr3:-:70151471..70153788

Molecular Weight (calculated)

41395.9 Da

IEP (calculated)

5.385

GRAVY (calculated)

-0.314

Length

372 amino acids

Sequence
(BLAST)

001: MEMESTPLLT PYKMGDFNLA HRVVLAPLTR CRAFGNVPQP EHMALYYRQR ATPGGFLIAE ACAVSESARG YPDVPGLWTH QQVEAWKPIV DAVHASGAVF
101: FAQLWHTGRA SPSEFQPNGQ APISSTDKQI PAQVNHSGDV NTFAVPRRLE TEEIPHVVND FRVAARNAIK AGFDGVEIHA ANGYLFDQFM KDSTNDRDDS
201: YGGSLENRCR FTAEVMAAVA DEVGANRLGV RLSPFADYMD CHDSNPEALA LHVIDETLNP LGVLYCHMVE PRMRVNPDDG IMTLEHMLLP FRRAFRGTFI
301: ANGGYDREEG NDAIARGRGY ADLIAYGRIF LANPDLPMRF AKNAPLNKYD RSTFYTSDPV VGYTDYPFLD QL

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.