Factsheet for Zm00001d032049_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

peroxisome 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003872_P002
Zm00001d003875_P001
Zm00001d025291_P001
Zm00001d025294_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G06050.1	Zm00001d003872_P002	AT1G13030.1	21798944
AT2G06050.1	Zm00001d003875_P001	AT1G13030.1	21798944
AT2G06050.1	Zm00001d025291_P001	AT1G13030.1	21798944
AT2G06050.1	Zm00001d025294_P002	AT1G13030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13971	Sorghum	peroxisome, plastid	96.24	95.52
Zm00001d050107_P001	Maize	extracellular, mitochondrion	94.49	94.49
Os08t0459600-01	Rice	cytosol	86.22	87.31
TraesCS7D01G405500.1	Wheat	golgi	84.21	86.15
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	83.71	85.64
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	83.21	85.13
TraesCS5B01G487600.1	Wheat	mitochondrion	73.93	77.43
KRH02619	Soybean	nucleus	73.93	74.12
GSMUA_Achr7P02310_001	Banana	mitochondrion	63.41	73.76
KRH19303	Soybean	nucleus	73.18	73.37
VIT_11s0016g01230.t01	Wine grape	plastid	71.93	72.11
Solyc07g007870.2.1	Tomato	plastid	70.68	71.21
CDY50415	Canola	peroxisome	68.42	70.18
AT2G06050.1	Thale cress	cytosol, plastid	68.42	69.82
PGSC0003DMT400079356	Potato	plastid	69.92	69.75
CDX93099	Canola	peroxisome	67.92	69.67
Bra013161.1-P	Field mustard	peroxisome	67.42	69.15
KRH02618	Soybean	mitochondrion	65.41	68.5
HORVU7Hr1G095960.1	Barley	plastid	82.71	68.18
KRH19304	Soybean	mitochondrion, plastid	66.17	68.04
Zm00001d040842_P001	Maize	cytoskeleton, cytosol, peroxisome	50.38	54.03
Zm00001d044906_P001	Maize	mitochondrion, peroxisome, plastid	50.13	53.62
Zm00001d037182_P001	Maize	extracellular	50.13	53.05
Zm00001d044908_P001	Maize	mitochondrion, peroxisome, plastid	49.37	52.39
Zm00001d011097_P001	Maize	cytosol	50.13	52.22
Zm00001d003584_P001	Maize	extracellular	50.13	51.15

Protein Annotations

MapMan:11.7.1.6	Gene3D:3.20.20.70	EntrezGene:732830	EMBL:AY921644	InterPro:Aldolase_TIM	EMBL:BT043414
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	ProteinID:ONM04295.1	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF67	UniProt:Q49HD8	SUPFAM:SSF51395	UniParc:UPI000057C56B
EnsemblPlantsGene:Zm00001d032049	EnsemblPlants:Zm00001d032049_P002	EnsemblPlants:Zm00001d032049_T002	:	:	:

Description

12-oxo-phytodienoic acid reductase7 12-oxo-phytodienoic acid reductase7

Coordinates

chr1:-:210749060..210752906

Molecular Weight (calculated)

44106.2 Da

IEP (calculated)

8.518

GRAVY (calculated)

-0.391

Length

399 amino acids

Sequence
(BLAST)

001: MASTDRSTPA EDEQQQKRPS LFSPYQMPRF RLAHRVVLAP MTRCRAPDAV PGPALAEYYA QRSTDGGLLI SEGTIISPSG PGFPRVPGIY NQEQTDAWRK
101: VVDAVHAKGA IFFCQLWHVG RASHQVYQPG AAAPISSTDK PISSRWRILM PDGSYGKYPT PRRLATSEIP EIVEQYRQAA VNAIKAGFDG IEIHGAHGYL
201: IDQFLKGGIN DRTDEYGGSL SNRCRFLLEV TRAVVSAIGA DRVAVRVSPA IDHLDAYDSN PLQLGLAVVE RLNALQQEAG RLAYLHVTQP RYTAYGQTES
301: GQHGSAEEES RLMRAVRGAY RGTFMCSGGY TRELGVEAIE SGDADLVSYG RLFIANPDLV ERFRRDAPLN KYVRKTFYTP DPVVGYTDYT FLGQPKARM

Best Arabidopsis Sequence Match ( AT2G06050.3 )
(BLAST)

001: MTAAQGNSNE TLFSSYKMGR FDLSHRVVLA PMTRCRALNG VPNAALAEYY AQRTTPGGFL ISEGTMVSPG SAGFPHVPGI YSDEQVEAWK QVVEAVHAKG
101: GFIFCQLWHV GRASHAVYQP NGGSPISSTN KPISENRWRV LLPDGSHVKY PKPRALEASE IPRVVEDYCL SALNAIRAGF DGIEIHGAHG YLIDQFLKDG
201: INDRTDQYGG SIANRCRFLK QVVEGVVSAI GASKVGVRVS PAIDHLDATD SDPLSLGLAV VGMLNKLQGV NGSKLAYLHV TQPRYHAYGQ TESGRQGSDE
301: EEAKLMKSLR MAYNGTFMSS GGFNKELGMQ AVQQGDADLV SYGRLFIANP DLVSRFKIDG ELNKYNRKTF YTQDPVVGYT DYPFLAPFSR L

Arabidopsis Description

OPR312-oxophytodienoate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUP0]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.