Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G328700.1 | |
| TraesCS1B01G342400.2 | |
| TraesCS1D01G331000.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G06050.1 | TraesCS1A01G328700.1 | AT1G13030.1 | 21798944 |
| AT2G06050.1 | TraesCS1B01G342400.2 | AT1G13030.1 | 21798944 |
| AT2G06050.1 | TraesCS1D01G331000.1 | AT1G13030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G311600.1 | Wheat | mitochondrion, peroxisome | 78.74 | 76.92 |
| Os08t0459600-01 | Rice | cytosol | 77.69 | 75.13 |
| Zm00001d050107_P001 | Maize | extracellular, mitochondrion | 77.95 | 74.44 |
| Zm00001d032049_P002 | Maize | extracellular, mitochondrion | 77.43 | 73.93 |
| EES13971 | Sorghum | peroxisome, plastid | 77.43 | 73.38 |
| GSMUA_Achr7P02310_001 | Banana | mitochondrion | 64.04 | 71.14 |
| KRH02619 | Soybean | nucleus | 67.19 | 64.32 |
| KRH19303 | Soybean | nucleus | 66.93 | 64.07 |
| Solyc07g007870.2.1 | Tomato | plastid | 65.09 | 62.63 |
| VIT_11s0016g01230.t01 | Wine grape | plastid | 65.35 | 62.56 |
| KRH02618 | Soybean | mitochondrion | 62.2 | 62.2 |
| AT2G06050.1 | Thale cress | cytosol, plastid | 63.52 | 61.89 |
| CDY50415 | Canola | peroxisome | 62.99 | 61.7 |
| KRH19304 | Soybean | mitochondrion, plastid | 62.47 | 61.34 |
| CDX93099 | Canola | peroxisome | 62.47 | 61.18 |
| PGSC0003DMT400079356 | Potato | plastid | 63.78 | 60.75 |
| Bra013161.1-P | Field mustard | peroxisome | 61.94 | 60.67 |
| TraesCS7B01G079500.1 | Wheat | mitochondrion | 51.44 | 53.26 |
| TraesCS1B01G019800.1 | Wheat | mitochondrion | 49.87 | 52.49 |
| TraesCS1B01G018700.1 | Wheat | peroxisome | 49.34 | 51.93 |
| TraesCS6B01G353200.2 | Wheat | plastid | 50.13 | 51.62 |
| TraesCS2B01G040000.1 | Wheat | cytosol | 49.87 | 51.49 |
| TraesCS4B01G356100.1 | Wheat | cytosol | 52.49 | 51.15 |
| TraesCS1B01G019700.1 | Wheat | mitochondrion | 48.56 | 51.1 |
| TraesCS6B01G464800.1 | Wheat | mitochondrion, peroxisome, plastid | 49.87 | 51.08 |
| TraesCS4B01G048500.1 | Wheat | mitochondrion | 48.29 | 50.83 |
| TraesCS2B01G328200.1 | Wheat | cytosol | 48.82 | 50.27 |
| TraesCS2B01G328100.1 | Wheat | plastid | 48.03 | 49.73 |
| TraesCS1B01G231000.2 | Wheat | peroxisome, plastid | 38.06 | 49.66 |
| TraesCS1B01G018800.1 | Wheat | cytosol | 40.42 | 49.04 |
| TraesCS7B01G079400.1 | Wheat | cytosol, vacuole | 35.96 | 48.07 |
| TraesCS1B01G019600.1 | Wheat | mitochondrion | 41.73 | 47.89 |
| TraesCS7B01G455400.1 | Wheat | cytosol | 41.99 | 47.06 |
| TraesCS7B01G079300.1 | Wheat | cytosol, peroxisome, plastid | 46.19 | 46.32 |
| TraesCS7B01G455300.1 | Wheat | mitochondrion | 40.94 | 45.48 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G487600.1 | EnsemblPlantsGene:TraesCS5B01G487600 | Gene3D:3.20.20.70 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:Aldolase_TIM | InterPro:IPR013785 | InterPro:OxRdtase_FMN_N | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF67 | PFAM:PF00724 |
| SUPFAM:SSF51395 | TIGR:cd02933 | MapMan:11.7.1.6 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:658542612..658548215
Molecular Weight (calculated)
41721.4 Da
IEP (calculated)
6.058
GRAVY (calculated)
-0.271
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQRPSLFSP YQMRRFSLAH RVVLAPLTRC RAIGGLPGPA LAEYYAQRST DGGLLISEAT AISPAGAGFP RVPGIYNQEQ IYAWKKVVDA VHAKGSIFFC
101: QLWHAGRASH QAYLPDGAAP ISSTEKPISA SRKTLLPDGS YGTYPVPRCL ATSEIPEVVE QYRQAAVNAI EAGFDGVEIH AAHGFIIDQF LKDGVNDRTD
201: EYGGSLPSRC RFLLEVTRAT VSAVGPDRVA VRVSPTIDNL DAYDSDPARL GMAVVERLNA LQEEVSSGGQ LAYLHLSRAM HGGGNAEEEG RLMRAMRDAY
301: RGTFMCGGGY TRELGMESVE RGDADLVSYG RHFIANPDLV ERFKLDAGLN EFVRKTFYTP DPVVGYTDYP FLDSQPESRM Q
101: QLWHAGRASH QAYLPDGAAP ISSTEKPISA SRKTLLPDGS YGTYPVPRCL ATSEIPEVVE QYRQAAVNAI EAGFDGVEIH AAHGFIIDQF LKDGVNDRTD
201: EYGGSLPSRC RFLLEVTRAT VSAVGPDRVA VRVSPTIDNL DAYDSDPARL GMAVVERLNA LQEEVSSGGQ LAYLHLSRAM HGGGNAEEEG RLMRAMRDAY
301: RGTFMCGGGY TRELGMESVE RGDADLVSYG RHFIANPDLV ERFKLDAGLN EFVRKTFYTP DPVVGYTDYP FLDSQPESRM Q
001: MTAAQGNSNE TLFSSYKMGR FDLSHRVVLA PMTRCRALNG VPNAALAEYY AQRTTPGGFL ISEGTMVSPG SAGFPHVPGI YSDEQVEAWK QVVEAVHAKG
101: GFIFCQLWHV GRASHAVYQP NGGSPISSTN KPISENRWRV LLPDGSHVKY PKPRALEASE IPRVVEDYCL SALNAIRAGF DGIEIHGAHG YLIDQFLKDG
201: INDRTDQYGG SIANRCRFLK QVVEGVVSAI GASKVGVRVS PAIDHLDATD SDPLSLGLAV VGMLNKLQGV NGSKLAYLHV TQPRYHAYGQ TESGRQGSDE
301: EEAKLMKSLR MAYNGTFMSS GGFNKELGMQ AVQQGDADLV SYGRLFIANP DLVSRFKIDG ELNKYNRKTF YTQDPVVGYT DYPFLAPFSR L
101: GFIFCQLWHV GRASHAVYQP NGGSPISSTN KPISENRWRV LLPDGSHVKY PKPRALEASE IPRVVEDYCL SALNAIRAGF DGIEIHGAHG YLIDQFLKDG
201: INDRTDQYGG SIANRCRFLK QVVEGVVSAI GASKVGVRVS PAIDHLDATD SDPLSLGLAV VGMLNKLQGV NGSKLAYLHV TQPRYHAYGQ TESGRQGSDE
301: EEAKLMKSLR MAYNGTFMSS GGFNKELGMQ AVQQGDADLV SYGRLFIANP DLVSRFKIDG ELNKYNRKTF YTQDPVVGYT DYPFLAPFSR L
Arabidopsis Description
OPR312-oxophytodienoate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUP0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.