Factsheet for TraesCS2B01G040000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G028600.1	Wheat	peroxisome	86.72	96.97
TraesCS2A01G026600.1	Wheat	peroxisome	95.94	95.94
TraesCS1B01G018700.1	Wheat	peroxisome	80.49	82.04
TraesCS1B01G019700.1	Wheat	mitochondrion	80.22	81.77
TraesCS4B01G048500.1	Wheat	mitochondrion	79.67	81.22
TraesCS1B01G019800.1	Wheat	mitochondrion	77.78	79.28
GSMUA_Achr2P20800_001	Banana	mitochondrion	73.44	74.25
TraesCS1B01G231000.2	Wheat	peroxisome, plastid	57.72	72.95
TraesCS1B01G018800.1	Wheat	cytosol	62.06	72.93
GSMUA_Achr2P20790_001	Banana	mitochondrion	59.62	72.85
TraesCS1B01G019600.1	Wheat	mitochondrion	64.23	71.39
TraesCS7B01G079500.1	Wheat	mitochondrion	68.02	68.21
TraesCS6B01G353200.2	Wheat	plastid	66.67	66.49
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	64.77	64.25
TraesCS2B01G328100.1	Wheat	plastid	63.96	64.13
TraesCS4B01G356100.1	Wheat	cytosol	67.75	63.94
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	48.24	62.46
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	63.69	61.84
TraesCS7B01G455400.1	Wheat	cytosol	56.64	61.47
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	62.06	61.23
TraesCS7B01G455300.1	Wheat	mitochondrion	56.64	60.93
KRH51591	Soybean	cytosol	60.98	60.0
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.7	59.89
KRH05151	Soybean	nucleus	56.1	58.81
TraesCS2B01G328200.1	Wheat	cytosol	58.81	58.65
KRH17523	Soybean	cytosol	61.79	58.02
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	53.93	51.03
TraesCS5B01G487600.1	Wheat	mitochondrion	51.49	49.87
KRH06010	Soybean	mitochondrion	19.51	40.91
HORVU2Hr1G004230.3	Barley	peroxisome	49.86	36.87

Protein Annotations

EnsemblPlants:TraesCS2B01G040000.1	EnsemblPlantsGene:TraesCS2B01G040000	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr2B:-:18177342..18178571

Molecular Weight (calculated)

40713.4 Da

IEP (calculated)

6.450

GRAVY (calculated)

-0.327

Length

369 amino acids

Sequence
(BLAST)

001: MEPQAEPKPI PLMTPYKMGA SLDLAHRVVL APLTRQRSYG NVPQPHAAVY YGQRATPGGM LITEATGVSD TAQGYTDTPG VWTAEQAEAW RPVVDAVHAK
101: GALFFCQLWH VGRVSKYGFQ PGGAAPVSST ERMVGPQVRH DGSTEEFSPP RRLAAEEIPM IVDDFRKAAR NAINAGFDGV EIHGGNGYLI EQFLKDSAND
201: RDDGYGGNLE NRCRFALEVV DAVAKEVGAH RVGIRLSPFM DYMDCHDSDP HALGLHMATK LNDHGILYLH MIEPRMALVD GRRVVPHRLL PYREAFKGTF
301: IANGGYDREE GDKAVASGYA DLVSFGRLFL ANPDLPKRLE LNAPLNKYNR LTFYISDPVV GYTDYPFLP

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.