Factsheet for TraesCS2D01G028600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G040000.1	Wheat	cytosol	96.97	86.72
TraesCS2A01G026600.1	Wheat	peroxisome	96.36	86.18
TraesCS1D01G013000.1	Wheat	mitochondrion	81.21	74.03
TraesCS1D01G013500.1	Wheat	cytosol	80.61	73.48
TraesCS1D01G013600.1	Wheat	cytosol	79.7	72.65
TraesCS1D01G013700.1	Wheat	mitochondrion	79.39	72.38
TraesCS7D01G176000.1	Wheat	cytosol	49.39	70.26
TraesCS1D01G219500.1	Wheat	peroxisome	76.67	69.13
GSMUA_Achr2P20800_001	Banana	mitochondrion	72.12	65.21
TraesCS1D01G013400.1	Wheat	cytosol	73.03	63.09
GSMUA_Achr2P20790_001	Banana	mitochondrion	56.97	62.25
TraesCS4D01G349500.1	Wheat	cytosol	68.79	62.02
TraesCS6D01G302300.2	Wheat	plastid	66.36	59.19
TraesCS2D01G309400.1	Wheat	plastid	65.45	58.38
TraesCS7D01G175800.1	Wheat	mitochondrion	51.52	56.86
TraesCS7D01G175900.2	Wheat	cytosol	68.79	55.64
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	62.73	55.35
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	56.36	54.23
TraesCS7D01G524600.1	Wheat	peroxisome	56.06	54.09
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	61.21	54.01
KRH51591	Soybean	cytosol	59.7	52.53
TraesCS7D01G175600.1	Wheat	mitochondrion	42.73	51.09
TraesCS2D01G309500.1	Wheat	golgi	56.97	50.81
KRH05151	Soybean	nucleus	53.94	50.57
KRH17523	Soybean	cytosol	59.7	50.13
TraesCS7D01G405500.1	Wheat	golgi	55.76	47.18
TraesCS7D01G175700.2	Wheat	mitochondrion	18.79	43.97
KRH06010	Soybean	mitochondrion	20.3	38.07
HORVU2Hr1G004230.3	Barley	peroxisome	54.24	35.87

Protein Annotations

EnsemblPlants:TraesCS2D01G028600.1	EnsemblPlantsGene:TraesCS2D01G028600	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr2D:+:11774695..11775912

Molecular Weight (calculated)

36598.7 Da

IEP (calculated)

6.890

GRAVY (calculated)

-0.285

Length

330 amino acids

Sequence
(BLAST)

001: MEPHAESKPI PLMTPYKMGS SLDLAHRVVL APLTRQRSYG NVPQPHAAVY YGPVVDAVHA KGALFFCQLW HVGRVSSYGF QPGGAAPVSS TQRMVGPQVR
101: HDGTTEEFSP PRRLAVEEIP MIVDDFRKAA RNAINAGFDG VEIHGGNGYL IEQFLKDSAN DRDDGYGGSL ENRCRFALEV VDAVAKEVGA HRVGIRLSPF
201: MDYMDCHDSD PHALGLHMAT KLNDHGILYL HMIEPRMALV DGRRVVPHRL LPYREAFKGT FIANGGYDRE DGDKAVASGY ADLVSFGRLF LANPDLPKRL
301: ELNAPLNKYN RMTFYISDPV VGYTDYPFLP

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.