Factsheet for TraesCS2D01G309500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G328200.1	Wheat	cytosol	96.22	96.22
HORVU2Hr1G077210.1	Barley	cytosol	88.38	86.74
Os04t0443750-00	Rice	cytoskeleton, cytosol, peroxisome	35.14	68.78
EES12232	Sorghum	mitochondrion	69.19	67.55
TraesCS7D01G175700.2	Wheat	mitochondrion	23.78	62.41
TraesCS6D01G302300.2	Wheat	plastid	60.27	60.27
TraesCS7D01G175800.1	Wheat	mitochondrion	48.65	60.2
TraesCS1D01G013500.1	Wheat	cytosol	58.38	59.67
TraesCS2D01G309400.1	Wheat	plastid	59.46	59.46
TraesCS4D01G349500.1	Wheat	cytosol	58.65	59.29
TraesCS1D01G013700.1	Wheat	mitochondrion	57.84	59.12
TraesCS1D01G013600.1	Wheat	cytosol	57.57	58.84
TraesCS1D01G219500.1	Wheat	peroxisome	57.84	58.47
TraesCS1D01G013000.1	Wheat	mitochondrion	56.76	58.01
TraesCS7D01G176000.1	Wheat	cytosol	36.22	57.76
TraesCS2D01G028600.1	Wheat	peroxisome	50.81	56.97
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.03	56.42
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	56.76	56.15
KRH51591	Soybean	cytosol	55.95	55.2
TraesCS1D01G013400.1	Wheat	cytosol	56.76	54.97
KRH05151	Soybean	nucleus	51.89	54.55
TraesCS7D01G175900.2	Wheat	cytosol	60.0	54.41
KRH17523	Soybean	cytosol	56.22	52.93
TraesCS7D01G175600.1	Wheat	mitochondrion	39.19	52.54
TraesCS7D01G524600.1	Wheat	peroxisome	48.11	52.05
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	47.84	51.6
TraesCS7D01G405500.1	Wheat	golgi	51.08	48.46
KRH06010	Soybean	mitochondrion	18.38	38.64

Protein Annotations

EnsemblPlants:TraesCS2D01G309500.1	EnsemblPlantsGene:TraesCS2D01G309500	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF59	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr2D:-:396712226..396713906

Molecular Weight (calculated)

41104.3 Da

IEP (calculated)

4.604

GRAVY (calculated)

-0.412

Length

370 amino acids

Sequence
(BLAST)

001: MEPIPLMTPY QMGPFEFSHR VVLAPMTRSR SYGNFPQPHA MQYYAQRATE GGLLISEATG VSADAQGMSA IPHTPGIWTK DQVQAWRPIV DSVHAKGAIF
101: FCQIWHVGRA SDMQQEPISS TDKPIERTPE NYSMDFSTPR SLTEEEIPDV VNQFRIAARN ALEAGFDGVE LHAGNGYLLD QFMKDGVNDR ADGYGGSLEN
201: RCRFTLEVVD AVSNQIGPYC VGVRLSPYSG CLSCRDSDPD ELAVYMAREL NRRDILYLNV VEPEMSWEGD AGALGAGHHR LQAMRDTFDG TLMVGGGYGR
301: EEGNCAIAEE YADLVAYGRL FLANPDLPER FRRNAPLNKY DRATFYTDDP VVGYTDYPFL GQTSKGNGMM

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.