Factsheet for TraesCS7D01G405500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
peroxisome 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, peroxisome
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G328700.1
TraesCS1B01G342400.2
TraesCS1D01G331000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G06050.1	TraesCS1A01G328700.1	AT1G13030.1	21798944
AT2G06050.1	TraesCS1B01G342400.2	AT1G13030.1	21798944
AT2G06050.1	TraesCS1D01G331000.1	AT1G13030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G412400.1	Wheat	mitochondrion, peroxisome	98.97	98.97
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	97.95	97.95
Os08t0459600-01	Rice	cytosol	90.0	89.09
Zm00001d050107_P001	Maize	extracellular, mitochondrion	86.67	84.71
Zm00001d032049_P002	Maize	extracellular, mitochondrion	86.15	84.21
EES13971	Sorghum	peroxisome, plastid	86.41	83.83
HORVU7Hr1G095960.1	Barley	plastid	97.18	78.31
KRH02619	Soybean	nucleus	75.13	73.62
KRH19303	Soybean	nucleus	75.13	73.62
GSMUA_Achr7P02310_001	Banana	mitochondrion	63.59	72.3
VIT_11s0016g01230.t01	Wine grape	plastid	72.82	71.36
Solyc07g007870.2.1	Tomato	plastid	72.31	71.21
PGSC0003DMT400079356	Potato	plastid	71.03	69.25
AT2G06050.1	Thale cress	cytosol, plastid	69.23	69.05
CDY50415	Canola	peroxisome	68.72	68.89
CDX93099	Canola	peroxisome	68.72	68.89
Bra013161.1-P	Field mustard	peroxisome	68.21	68.38
KRH02618	Soybean	mitochondrion	66.41	67.98
KRH19304	Soybean	mitochondrion, plastid	66.92	67.27
TraesCS4D01G349500.1	Wheat	cytosol	52.56	56.01
TraesCS2D01G028600.1	Wheat	peroxisome	47.18	55.76
TraesCS7D01G175800.1	Wheat	mitochondrion	42.56	55.52
TraesCS7D01G175700.2	Wheat	mitochondrion	20.0	55.32
TraesCS7D01G176000.1	Wheat	cytosol	32.31	54.31
TraesCS6D01G302300.2	Wheat	plastid	51.28	54.05
TraesCS1D01G013700.1	Wheat	mitochondrion	50.0	53.87
TraesCS1D01G013500.1	Wheat	cytosol	50.0	53.87
TraesCS1D01G219500.1	Wheat	peroxisome	49.74	53.01
TraesCS2D01G309400.1	Wheat	plastid	50.0	52.7
TraesCS1D01G013000.1	Wheat	mitochondrion	48.72	52.49
TraesCS1D01G013600.1	Wheat	cytosol	48.46	52.21
TraesCS2D01G309500.1	Wheat	golgi	48.46	51.08
TraesCS1D01G013400.1	Wheat	cytosol	48.97	50.0
TraesCS7D01G175900.2	Wheat	cytosol	51.54	49.26
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	41.54	47.23
TraesCS7D01G524600.1	Wheat	peroxisome	41.28	47.08
TraesCS7D01G175600.1	Wheat	mitochondrion	30.77	43.48

Protein Annotations

MapMan:11.7.1.6	Gene3D:3.20.20.70	InterPro:Aldolase_TIM	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006629	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009620	GO:GO:0009695	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010181	GO:GO:0010193	GO:GO:0016491	GO:GO:0016629
GO:GO:0031408	GO:GO:0048443	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724
PANTHER:PTHR22893	PANTHER:PTHR22893:SF67	SUPFAM:SSF51395	EnsemblPlantsGene:TraesCS7D01G405500	EnsemblPlants:TraesCS7D01G405500.1	TIGR:cd02933

Description

No Description!

Coordinates

chr7D:+:523045580..523048676

Molecular Weight (calculated)

42863.1 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.304

Length

390 amino acids

Sequence
(BLAST)

001: MDRPAPDQRP TLFSPYQMRR FSLAHRVVLA PMTRCRAIGG LPGPALAEYY AQRATQGGLL ISEGTVVSPA GPGFPHVPGI YNQEQIDGWK KVVDAVHAKG
101: GIFFCQLWHV GRASHQVYQP DGAAPISSTD KPISARWKIL LPDGSYGTYP TPRRLATSEI PDIVEQYRQA AINAIKAGFD GIEIHGAHGY IIDQFLKDGI
201: NDRTDEYGGS LTNRCKFLLE VTRAVLSAIG AERTAVRVSP AIDHLDAYDS NPMQLGMAVV ERLNALQQEA GQLAYLHVTQ PRYAAYGQTE SGPHGSAEEE
301: SRLMRTLRGA YRGTFMCSGG YTRELGLEAV ESGDADLVSF GRLFISNPDL VERLRLNAGL NKYVRKTFYT PDPVVGYTDY PFLGKPKARM

Best Arabidopsis Sequence Match ( AT2G06050.3 )
(BLAST)

001: MTAAQGNSNE TLFSSYKMGR FDLSHRVVLA PMTRCRALNG VPNAALAEYY AQRTTPGGFL ISEGTMVSPG SAGFPHVPGI YSDEQVEAWK QVVEAVHAKG
101: GFIFCQLWHV GRASHAVYQP NGGSPISSTN KPISENRWRV LLPDGSHVKY PKPRALEASE IPRVVEDYCL SALNAIRAGF DGIEIHGAHG YLIDQFLKDG
201: INDRTDQYGG SIANRCRFLK QVVEGVVSAI GASKVGVRVS PAIDHLDATD SDPLSLGLAV VGMLNKLQGV NGSKLAYLHV TQPRYHAYGQ TESGRQGSDE
301: EEAKLMKSLR MAYNGTFMSS GGFNKELGMQ AVQQGDADLV SYGRLFIANP DLVSRFKIDG ELNKYNRKTF YTQDPVVGYT DYPFLAPFSR L

Arabidopsis Description

OPR312-oxophytodienoate reductase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUP0]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.