Factsheet for TraesCS1D01G013600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G015700.1	Wheat	cytosol	98.62	98.62
TraesCS1D01G013500.1	Wheat	cytosol	95.3	95.3
TraesCS1D01G013700.1	Wheat	mitochondrion	93.09	93.09
HORVU1Hr1G001950.4	Barley	mitochondrion, peroxisome	95.3	91.03
TraesCS1D01G013000.1	Wheat	mitochondrion	88.95	88.95
TraesCS1D01G219500.1	Wheat	peroxisome	81.49	80.6
TraesCS2D01G028600.1	Wheat	peroxisome	72.65	79.7
GSMUA_Achr2P20790_001	Banana	mitochondrion	62.71	75.17
GSMUA_Achr2P20800_001	Banana	mitochondrion	75.41	74.79
TraesCS7D01G176000.1	Wheat	cytosol	45.03	70.26
TraesCS1D01G013400.1	Wheat	cytosol	73.2	69.37
TraesCS7D01G175700.2	Wheat	mitochondrion	26.24	67.38
TraesCS7D01G175800.1	Wheat	mitochondrion	55.52	67.22
TraesCS4D01G349500.1	Wheat	cytosol	66.57	65.85
TraesCS2D01G309400.1	Wheat	plastid	66.3	64.86
TraesCS7D01G175900.2	Wheat	cytosol	72.93	64.71
TraesCS6D01G302300.2	Wheat	plastid	65.75	64.32
TraesCS7D01G175600.1	Wheat	mitochondrion	47.51	62.32
KRH51591	Soybean	cytosol	63.54	61.33
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	62.71	60.7
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	56.35	59.48
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	61.33	59.36
TraesCS7D01G524600.1	Wheat	peroxisome	55.25	58.48
KRH05151	Soybean	nucleus	56.08	57.67
TraesCS2D01G309500.1	Wheat	golgi	58.84	57.57
KRH17523	Soybean	cytosol	61.6	56.74
TraesCS7D01G405500.1	Wheat	golgi	52.21	48.46
KRH06010	Soybean	mitochondrion	19.89	40.91

Protein Annotations

EnsemblPlants:TraesCS1D01G013600.1	EnsemblPlantsGene:TraesCS1D01G013600	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr1D:+:6817550..6819041

Molecular Weight (calculated)

40239.8 Da

IEP (calculated)

5.596

GRAVY (calculated)

-0.244

Length

362 amino acids

Sequence
(BLAST)

001: MEPIPLLTPY KMGQFDLAHR VVLAPLTRQR SYGNVPQSHA AVYYSQRATA GGLLIAEATG VSDTAQGYND TPGIWTAEHV EAWKPIVAAV HQKGALFFCQ
101: IWHCGRVSTF ELQPGGTAPL SSTEKGVGPQ MSFDGRLEEF APPRRLTVEE IPAIVDDFRK AARNAIDAGF DGVEIHGANG YIIEQFLKDS ANDRIDEYGG
201: SLENRCRFAL EVVDAVVKEV GGHRVGIRLS PFTDYMDCHD SDPHSLALYL STKLNDHGIL YIHMIEPRMA IVDGRRVVPK RLLPYREVFK GTFIANGGYD
301: REEGGKVVTE GYTDLVAFGR LFLANPDLPK RFEVGAELNK YDRMTFYTSD PVVGYTDYPF LE

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.