Factsheet for TraesCS1D01G013700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G019800.1	Wheat	mitochondrion	95.86	95.86
TraesCS1D01G013500.1	Wheat	cytosol	93.65	93.65
TraesCS1D01G013600.1	Wheat	cytosol	93.09	93.09
TraesCS1D01G013000.1	Wheat	mitochondrion	87.29	87.29
TraesCS1A01G015800.1	Wheat	cytoskeleton, cytosol, peroxisome	92.82	86.6
HORVU1Hr1G001960.1	Barley	peroxisome	93.65	84.96
TraesCS2D01G028600.1	Wheat	peroxisome	72.38	79.39
TraesCS1D01G219500.1	Wheat	peroxisome	79.28	78.42
GSMUA_Achr2P20790_001	Banana	mitochondrion	61.05	73.18
GSMUA_Achr2P20800_001	Banana	mitochondrion	73.76	73.15
TraesCS7D01G176000.1	Wheat	cytosol	44.75	69.83
TraesCS1D01G013400.1	Wheat	cytosol	71.82	68.06
TraesCS7D01G175800.1	Wheat	mitochondrion	55.25	66.89
TraesCS4D01G349500.1	Wheat	cytosol	66.85	66.12
TraesCS2D01G309400.1	Wheat	plastid	66.3	64.86
TraesCS7D01G175900.2	Wheat	cytosol	72.93	64.71
TraesCS7D01G175700.2	Wheat	mitochondrion	25.14	64.54
TraesCS6D01G302300.2	Wheat	plastid	65.75	64.32
TraesCS7D01G175600.1	Wheat	mitochondrion	46.69	61.23
KRH51591	Soybean	cytosol	62.43	60.27
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	61.6	59.63
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.22	58.29
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	54.97	58.02
TraesCS7D01G524600.1	Wheat	peroxisome	54.7	57.89
TraesCS2D01G309500.1	Wheat	golgi	59.12	57.84
KRH05151	Soybean	nucleus	55.8	57.39
KRH17523	Soybean	cytosol	61.33	56.49
TraesCS7D01G405500.1	Wheat	golgi	53.87	50.0
KRH06010	Soybean	mitochondrion	19.89	40.91

Protein Annotations

EnsemblPlants:TraesCS1D01G013700.1	EnsemblPlantsGene:TraesCS1D01G013700	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr1D:+:6864266..6866057

Molecular Weight (calculated)

40248.9 Da

IEP (calculated)

5.786

GRAVY (calculated)

-0.243

Length

362 amino acids

Sequence
(BLAST)

001: MEPIPLLTPY KMGQFDLAHR VVLAPLTRRR SYANMPQPHA AVYYSQRATA GGLLIAEATV VSNTGRGYTD TPGIWTAEHV EAWKPIVAAV HAKGALFFCQ
101: IWHVGRVSTF ELQPGGAAPL SSTEKGVGPQ MSFDGRLEEF SPPRRLTVEE IPALVDDFRK AARNAIDAGF DGVEIHGANG YIIEQFLKDS ANDRTDEYGG
201: SLENRCRFAL EVVDAVVKEV GGHRVGIRLS PFADYMDCHD SDPHSLALYM STKLNDHDIL YIHMIEPRMA IVDGRRVVPK RLLPYREAFK GTFVANGGYD
301: REEGGKVVAE GYTDLVAFGR LFLANPDLPN RFEVGADLNK YDRMTFYTPD PVIGYTDYPF LE

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.