Factsheet for TraesCS1D01G013400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G015500.1	Wheat	cytosol	92.41	93.14
TraesCS1B01G019600.1	Wheat	mitochondrion	75.39	86.75
TraesCS1D01G013500.1	Wheat	cytosol	69.9	73.76
TraesCS1D01G013000.1	Wheat	mitochondrion	69.37	73.2
TraesCS1D01G013600.1	Wheat	cytosol	69.37	73.2
TraesCS2D01G028600.1	Wheat	peroxisome	63.09	73.03
TraesCS1D01G013700.1	Wheat	mitochondrion	68.06	71.82
TraesCS1D01G219500.1	Wheat	peroxisome	67.28	70.22
GSMUA_Achr2P20790_001	Banana	mitochondrion	55.24	69.87
GSMUA_Achr2P20800_001	Banana	mitochondrion	66.23	69.32
TraesCS7D01G176000.1	Wheat	cytosol	41.1	67.67
TraesCS7D01G175800.1	Wheat	mitochondrion	50.0	63.88
TraesCS4D01G349500.1	Wheat	cytosol	59.95	62.57
TraesCS6D01G302300.2	Wheat	plastid	59.69	61.62
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	59.16	60.43
TraesCS2D01G309400.1	Wheat	plastid	58.38	60.27
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	53.4	59.48
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	58.12	59.36
TraesCS7D01G175900.2	Wheat	cytosol	63.35	59.31
TraesCS7D01G524600.1	Wheat	peroxisome	52.09	58.19
KRH51591	Soybean	cytosol	56.81	57.87
TraesCS7D01G175700.2	Wheat	mitochondrion	21.2	57.45
TraesCS7D01G175600.1	Wheat	mitochondrion	41.36	57.25
TraesCS2D01G309500.1	Wheat	golgi	54.97	56.76
KRH05151	Soybean	nucleus	50.26	54.55
KRH17523	Soybean	cytosol	56.02	54.45
TraesCS7D01G405500.1	Wheat	golgi	50.0	48.97
KRH06010	Soybean	mitochondrion	19.9	43.18

Protein Annotations

EnsemblPlants:TraesCS1D01G013400.1	EnsemblPlantsGene:TraesCS1D01G013400	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr1D:-:6786484..6787791

Molecular Weight (calculated)

41407.1 Da

IEP (calculated)

6.143

GRAVY (calculated)

-0.270

Length

382 amino acids

Sequence
(BLAST)

001: MAGEDGETVT VAAAAIPLLT PYRTGGGELE LAHRVVLAPL TRQRSPGNLP QPHAAVYYAQ RATAGGMLIT EATGVSAAAQ GHRPTPGVWA GEQVEAWRPV
101: VDAVHAKGAV VFCQLWHVGR VVGKLRPDGA RAETPQPVSS TGRPIATPRM NDGVEEEFAT PRRLDVAGIA GVVDDFRRAA RNAVDAGFDG VEIHGAHGYL
201: VEQFLKDSAN DRDDEYGGSL ENRCRFALEV VTAVAEEIGG RRLGVRLSPF ADYMDCHDSD PHALALHMAT KLKGIPEGIL YLHMMEPRMA RADGRRVVPK
301: RLRPYRDAFG GAFIAAGGYD REEGNKVVRE GYTDLVAFGR LFLANPDLPK RFELDAELNG YDRATFYTSD PVVGYTDYPF LG

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.